C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family G (WHITE), member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040505 Abcg5 10090 - 17:84658234-84683011 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000066175 Abcg5-001 84658234-84683011 protein_coding
  ENSMUST00000163375 Abcg5-002 84658488-84682202 protein_coding
  ENSMUST00000171544 Abcg5-003 84669917-84674370 processed_transcript
  ENSMUST00000172439 Abcg5-004 84670395-84676426 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000066175ENSMUST00000163375ENSMUST00000171544ENSMUST00000172439
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000066175 N/A 0.096±0.00 0.113±0.00 0.402±0.00 0.265±0.05 2.895±1.04 0.041±0.00 0.164±0.06 32.947±29.55 N/A N/A 0.264±0.15 0.661±0.00
ENSMUST00000163375 0.128±0.06 0.096±0.05 N/A N/A 0.187±0.11 2.653±1.40 0.021±0.00 N/A N/A 0.129±0.06 0.029±0.00 0.301±0.12 0.074±0.03
ENSMUST00000171544 0.167±0.03 N/A N/A 0.030±0.00 0.042±0.00 N/A N/A N/A N/A N/A N/A 0.292±0.00 N/A
ENSMUST00000172439 N/A N/A N/A 0.681±0.00 0.107±0.00 1.736±0.00 N/A 0.140±0.00 N/A 0.146±0.02 N/A 0.120±0.01 0.079±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XP CIL_0001XP_0002 CGP 17:84626496-84683011
CIL_0001XO CIL_0001XO_0002 CGP 17:84658234-84700333

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0007584 IEA response to nutrient
GO:0007588 IMP excretion
GO:0010212 IEA response to ionizing radiation
GO:0010949 IEA negative regulation of intestinal phytosterol absorption
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016324 IMP apical plasma membrane
GO:0016887 IEA ATPase activity
GO:0017127 IMP cholesterol transporter activity
GO:0030299 IC intestinal cholesterol absorption
GO:0033344 IMP cholesterol efflux
GO:0042493 IEA response to drug
GO:0042632 IEA cholesterol homeostasis
GO:0045177 IDA apical part of cell
GO:0045796 IEA negative regulation of intestinal cholesterol absorption
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063078 abcg5 ATP-binding cassette, sub-family G (WHITE), member 5 protein_coding Danio_rerio
ENSG00000138075 ABCG5 ATP-binding cassette, sub-family G (WHITE), member 5 protein_coding Homo_sapiens

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