C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001XO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138075-ENSG00000143921 CGP 9606 2:43812472-43878466
GeneTranscriptPositionBiotype
ENSG00000138075 (ABCG5)
ATP-binding cassette, sub-family G (WHITE), member 5 		ENST00000260645 (ABCG5-001) 43812472-43838819 protein_coding
ENST00000405322 (ABCG5-002) 43812560-43838752 protein_coding
ENST00000409962 (ABCG5-004) 43812843-43838865 nonsense_mediated_decay
ENST00000486512 (ABCG5-003) 43812560-43838750 nonsense_mediated_decay
ENSG00000143921 (ABCG8)
ATP-binding cassette, sub-family G (WHITE), member 8 		ENST00000272286 (ABCG8-001) 43838964-43878466 protein_coding
CIL_0001XO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040505-ENSMUSG00000024254 CGP 10090 17:84658234-84700333
GeneTranscriptPositionBiotype
ENSMUSG00000024254 (Abcg8)
ATP-binding cassette, sub-family G (WHITE), member 8 		ENSMUST00000045714 (Abcg8-001) 84683121-84700333 protein_coding
ENSMUST00000170725 (Abcg8-002) 84676302-84699333 protein_coding
ENSMUST00000171915 (Abcg8-003) 84683131-84698963 protein_coding
ENSMUSG00000040505 (Abcg5)
ATP-binding cassette, sub-family G (WHITE), member 5 		ENSMUST00000066175 (Abcg5-001) 84658234-84683011 protein_coding
ENSMUST00000163375 (Abcg5-002) 84658488-84682202 protein_coding
ENSMUST00000171544 (Abcg5-003) 84669917-84674370 processed_transcript
ENSMUST00000172439 (Abcg5-004) 84670395-84676426 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XO_0001ENSG00000138075ENST00000260645ENST00000405322ENST00000409962ENST00000486512ENSG00000143921ENST00000272286CIL_0001XO_0002ENSMUSG00000024254ENSMUST00000045714ENSMUST00000170725ENSMUST00000171915ENSMUSG00000040505ENSMUST00000066175ENSMUST00000163375ENSMUST00000171544ENSMUST00000172439
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XO_0001ENSG00000138075ENST00000260645ENST00000405322ENST00000409962ENST00000486512ENSG00000143921ENST00000272286CIL_0001XO_0002ENSMUSG00000024254ENSMUST00000045714ENSMUST00000170725ENSMUST00000171915ENSMUSG00000040505ENSMUST00000066175ENSMUST00000163375ENSMUST00000171544ENSMUST00000172439
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138075 ENST00000260645 N/A N/A N/A 0.067±0.05 N/A N/A N/A 4.304±0.00 N/A N/A N/A 0.019±0.00 N/A 0.037±0.00
ENST00000405322 N/A N/A N/A N/A N/A N/A 0.011±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000409962 N/A 0.011±0.00 N/A 0.037±0.00 0.026±0.00 0.029±0.01 N/A N/A N/A N/A N/A N/A N/A 0.031±0.00
ENST00000486512 0.016±0.00 0.019±0.00 0.044±0.00 N/A 0.098±0.00 N/A 0.039±0.00 1.569±0.00 0.022±0.00 0.028±0.00 N/A 0.011±0.00 0.015±0.00 N/A
ENSG00000143921 ENST00000272286 N/A 0.008±0.00 0.222±0.00 0.139±0.03 0.008±0.00 0.117±0.00 N/A 6.086±0.00 10.892±0.00 N/A N/A 0.018±0.00 N/A 0.086±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024254 ENSMUST00000045714 0.027±0.00 0.084±0.00 N/A 0.168±0.00 0.079±0.02 0.721±0.02 0.018±0.00 0.060±0.01 12.430±6.84 0.028±0.01 0.008±0.00 0.056±0.03 0.012±0.00 N/A
ENSMUST00000170725 0.052±0.03 0.066±0.03 N/A 0.013±0.00 0.104±0.04 1.183±0.48 N/A 0.095±0.04 0.202±0.01 N/A N/A N/A 0.227±0.00 1.082±0.68
ENSMUST00000171915 0.010±0.00 N/A 0.052±0.00 N/A 0.051±0.03 1.773±0.72 N/A 0.213±0.00 25.288±14.34 0.080±0.00 N/A 0.096±0.07 0.095±0.10 1.249±0.31
ENSMUSG00000040505 ENSMUST00000066175 N/A 0.096±0.00 0.113±0.00 0.402±0.00 0.265±0.05 2.895±1.04 0.041±0.00 0.164±0.06 32.947±29.55 N/A N/A 0.264±0.15 0.661±0.00 N/A
ENSMUST00000163375 0.128±0.06 0.096±0.05 N/A N/A 0.187±0.11 2.653±1.40 0.021±0.00 N/A N/A 0.129±0.06 0.029±0.00 0.301±0.12 0.074±0.03 N/A
ENSMUST00000171544 0.167±0.03 N/A N/A 0.030±0.00 0.042±0.00 N/A N/A N/A N/A N/A N/A 0.292±0.00 N/A N/A
ENSMUST00000172439 N/A N/A N/A 0.681±0.00 0.107±0.00 1.736±0.00 N/A 0.140±0.00 N/A 0.146±0.02 N/A 0.120±0.01 0.079±0.00 N/A

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