C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: STAM binding protein-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371924 STAMBPL1-003 ENSG00000138134 9606 + 10:88901075-88923487 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverLungOvaryENST00000371924
Transcript ID Breast Colon Liver Lung Ovary
ENST00000371924 0.203±0.00 0.986±0.00 0.399±0.00 1.228±0.00 1.483±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RY CIL_0001RY_0001 CGP 10:88822132-88975153
CIL_0001IX CIL_0001IX_0001 CGP 10:88879734-88991390

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0008237 IEA metallopeptidase activity
GO:0016020 IDA membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054956 Stambpl1-001 protein_coding Mus_musculus 0 1541
ENSMUST00000119603 Stambpl1-003 protein_coding Mus_musculus 0 1539
ENSMUST00000125232 Stambpl1-002 retained_intron Mus_musculus 0 1014
ENSMUST00000129535 Stambpl1-004 protein_coding Mus_musculus 0 451

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