C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 24
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000138639 ARHGAP24 9606 + 4:85475114-86002670 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264343 ARHGAP24-002 85930273-86002668 protein_coding
  ENST00000395183 ARHGAP24-005 85778706-86001223 protein_coding
  ENST00000395184 ARHGAP24-001 85475114-86002670 protein_coding
  ENST00000502537 ARHGAP24-012 85923734-85975766 processed_transcript
  ENST00000503917 ARHGAP24-011 85924697-85942450 processed_transcript
  ENST00000503995 ARHGAP24-003 85475238-85972367 protein_coding
  ENST00000505856 ARHGAP24-007 85475486-85570932 retained_intron
  ENST00000506421 ARHGAP24-008 85475443-85723732 processed_transcript
  ENST00000509300 ARHGAP24-010 85827745-85972168 protein_coding
  ENST00000509709 ARHGAP24-013 85570593-85722386 retained_intron
  ENST00000512201 ARHGAP24-009 85604153-85942205 protein_coding
  ENST00000514229 ARHGAP24-006 85827893-86000596 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264343ENST00000395183ENST00000395184ENST00000502537ENST00000503917ENST00000503995ENST00000505856ENST00000506421ENST00000509300ENST00000514229
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264343 N/A N/A 1.154±0.00 N/A 0.529±0.00 N/A N/A 5.446±0.00 0.496±0.00 0.475±0.00 N/A N/A N/A N/A
ENST00000395183 2.622±0.00 2.710±0.00 N/A N/A 1.394±0.51 2.970±0.00 0.836±0.00 11.325±0.00 0.756±0.07 2.076±0.59 0.223±0.04 0.746±0.20 3.505±0.51 2.123±0.00
ENST00000395184 1.508±0.00 1.700±0.00 N/A 3.411±0.00 1.942±0.00 1.090±0.00 0.683±0.34 N/A 0.243±0.00 2.272±0.00 0.353±0.00 0.665±0.36 1.259±0.19 0.554±0.10
ENST00000502537 N/A N/A 10.111±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503917 N/A N/A N/A N/A N/A N/A N/A 1.785±0.00 N/A N/A N/A N/A N/A N/A
ENST00000503995 N/A N/A N/A 1.569±0.00 2.693±0.00 N/A 1.489±0.00 1.336±0.00 2.477±0.00 4.120±0.00 N/A N/A N/A N/A
ENST00000505856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.117±0.00 N/A N/A
ENST00000506421 N/A N/A N/A N/A N/A 3.095±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509300 N/A N/A 15.450±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514229 1.992±0.00 2.742±0.00 9.335±0.00 N/A 0.909±0.00 1.270±0.00 1.537±0.14 4.342±3.69 1.194±0.64 2.697±0.74 0.641±0.10 0.976±0.04 4.113±0.91 2.383±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006J5 CIL_0006J5_0001 CGP 4:84669610-86002670
CIL_00093A CIL_00093A_0001 VISTA 4:85067103-85670160
CIL_000530 CIL_000530_0002 CGP 4:85475114-86594131

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005925 IEA focal adhesion
GO:0007165 IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0030154 IEA cell differentiation
GO:0030675 IEA Rac GTPase activator activity
GO:0032863 IEA activation of Rac GTPase activity
GO:0035021 IEA negative regulation of Rac protein signal transduction
GO:0035313 IEA wound healing, spreading of epidermal cells
GO:0042995 IEA cell projection
GO:0051056 TAS regulation of small GTPase mediated signal transduction
GO:1900028 IEA negative regulation of ruffle assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060175 arhgap24 Rho GTPase activating protein 24 protein_coding Danio_rerio
ENSMUSG00000057315 Arhgap24 Rho GTPase activating protein 24 protein_coding Mus_musculus

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