C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 24
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057315 Arhgap24 10090 + 5:102481391-102897936 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000070000 Arhgap24-006 102845007-102897829 protein_coding
  ENSMUST00000073302 Arhgap24-201 102481391-102897936 protein_coding
  ENSMUST00000094559 Arhgap24-001 102481391-102897829 protein_coding
  ENSMUST00000112852 Arhgap24-003 102768771-102897829 protein_coding
  ENSMUST00000112853 Arhgap24-005 102724973-102897829 protein_coding
  ENSMUST00000112854 Arhgap24-004 102481553-102897829 protein_coding
  ENSMUST00000126125 Arhgap24-002 102481530-102667832 retained_intron
  ENSMUST00000130222 Arhgap24-007 102809049-102875860 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070000ENSMUST00000073302ENSMUST00000094559ENSMUST00000112852ENSMUST00000112853ENSMUST00000112854ENSMUST00000126125
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070000 N/A N/A N/A 0.574±0.01 N/A 1.736±0.31 N/A 13.024±0.79 0.293±0.11 N/A N/A 0.600±0.00 0.639±0.06 0.148±0.00
ENSMUST00000073302 N/A N/A N/A N/A 1.689±0.00 0.758±0.00 N/A N/A 0.796±0.00 1.465±0.00 0.507±0.00 0.893±0.03 0.166±0.00 0.461±0.00
ENSMUST00000094559 3.079±0.20 0.828±0.15 2.192±0.76 0.584±0.02 1.744±0.55 1.818±0.18 0.764±0.00 N/A 1.278±0.72 1.658±0.23 0.827±0.23 1.414±0.62 0.851±0.55 0.235±0.08
ENSMUST00000112852 N/A N/A N/A 0.942±0.00 1.816±0.09 2.151±1.09 6.213±0.98 47.905±12.85 N/A 1.518±0.24 3.118±1.65 N/A 0.871±0.45 N/A
ENSMUST00000112853 2.183±0.22 2.672±1.56 2.287±0.00 0.856±0.07 1.683±0.00 3.718±1.54 1.153±0.26 N/A 1.193±0.62 2.106±0.35 0.389±0.00 2.931±0.99 1.419±0.65 0.489±0.17
ENSMUST00000112854 4.079±1.85 3.899±1.14 N/A N/A 3.345±1.48 N/A N/A N/A 0.544±0.33 2.821±1.09 0.525±0.01 1.092±0.28 0.890±0.00 0.318±0.11
ENSMUST00000126125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.135±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006J5 CIL_0006J5_0002 CGP 5:101832956-102897936
CIL_00093A CIL_00093A_0002 VISTA 5:102073255-102675763
CIL_000530 CIL_000530_0003 CGP 5:102481391-103211334

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005925 IDA focal adhesion
GO:0007165 IEA signal transduction
GO:0030154 IEA cell differentiation
GO:0030675 IMP Rac GTPase activator activity
GO:0032863 IMP activation of Rac GTPase activity
GO:0035021 IMP negative regulation of Rac protein signal transduction
GO:0035313 IMP wound healing, spreading of epidermal cells
GO:0042995 IEA cell projection
GO:1900028 IMP negative regulation of ruffle assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060175 arhgap24 Rho GTPase activating protein 24 protein_coding Danio_rerio
ENSG00000138639 ARHGAP24 Rho GTPase activating protein 24 protein_coding Homo_sapiens

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