C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395184 ARHGAP24-001 ENSG00000138639 9606 + 4:85475114-86002670 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000395184
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000395184 1.508±0.00 1.700±0.00 3.411±0.00 1.942±0.00 1.090±0.00 0.683±0.34 0.243±0.00 2.272±0.00 0.353±0.00 0.665±0.36 1.259±0.19 0.554±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006J5 CIL_0006J5_0001 CGP 4:84669610-86002670
CIL_00093A CIL_00093A_0001 VISTA 4:85067103-85670160
CIL_000530 CIL_000530_0002 CGP 4:85475114-86594131

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005925 IEA focal adhesion
GO:0007165 IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0030154 IEA cell differentiation
GO:0030675 IEA Rac GTPase activator activity
GO:0032863 IEA activation of Rac GTPase activity
GO:0035021 IEA negative regulation of Rac protein signal transduction
GO:0035313 IEA wound healing, spreading of epidermal cells
GO:0042995 IEA cell projection
GO:0051056 TAS regulation of small GTPase mediated signal transduction
GO:1900028 IEA negative regulation of ruffle assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094559 Arhgap24-001 protein_coding Mus_musculus 0 2861
ENSMUST00000073302 Arhgap24-201 protein_coding Mus_musculus 0 2719
ENSMUST00000112854 Arhgap24-004 protein_coding Mus_musculus 0 2623
ENSMUST00000112853 Arhgap24-005 protein_coding Mus_musculus 0 2512
ENSMUST00000112852 Arhgap24-003 protein_coding Mus_musculus 0 2512
ENSMUST00000070000 Arhgap24-006 protein_coding Mus_musculus 0 2335
ENSMUST00000126125 Arhgap24-002 retained_intron Mus_musculus 0 355

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