C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006J5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163625-ENSG00000138639 CGP 9606 4:84669610-86002670
GeneTranscriptPositionBiotype
ENSG00000138639 (ARHGAP24)
Rho GTPase activating protein 24 		ENST00000264343 (ARHGAP24-002) 85930273-86002668 protein_coding
ENST00000395183 (ARHGAP24-005) 85778706-86001223 protein_coding
ENST00000395184 (ARHGAP24-001) 85475114-86002670 protein_coding
ENST00000502537 (ARHGAP24-012) 85923734-85975766 processed_transcript
ENST00000503917 (ARHGAP24-011) 85924697-85942450 processed_transcript
ENST00000503995 (ARHGAP24-003) 85475238-85972367 protein_coding
ENST00000505856 (ARHGAP24-007) 85475486-85570932 retained_intron
ENST00000506421 (ARHGAP24-008) 85475443-85723732 processed_transcript
ENST00000509300 (ARHGAP24-010) 85827745-85972168 protein_coding
ENST00000509709 (ARHGAP24-013) 85570593-85722386 retained_intron
ENST00000512201 (ARHGAP24-009) 85604153-85942205 protein_coding
ENST00000514229 (ARHGAP24-006) 85827893-86000596 protein_coding
ENSG00000163625 (WDFY3)
WD repeat and FYVE domain containing 3 		ENST00000295888 (WDFY3-001) 84669610-84966391 protein_coding
ENST00000425179 (WDFY3-002) 84672291-84682948 retained_intron
ENST00000426414 (WDFY3-003) 84808866-84896941 retained_intron
ENST00000502713 (WDFY3-006) 84860564-84966391 protein_coding
ENST00000504839 (WDFY3-010) 84735106-84739330 retained_intron
ENST00000504990 (WDFY3-007) 84849673-84860563 retained_intron
ENST00000505923 (WDFY3-011) 84801782-84810107 processed_transcript
ENST00000509172 (WDFY3-005) 84860412-84966350 protein_coding
ENST00000509825 (WDFY3-009) 84751248-84755399 retained_intron
ENST00000512267 (WDFY3-008) 84801790-84804174 processed_transcript
ENST00000514071 (WDFY3-004) 84841192-84850015 protein_coding
ENST00000514711 (WDFY3-013) 84691726-84733462 protein_coding
ENSG00000180769 (WDFY3-AS2)
WDFY3 antisense RNA 2 		ENST00000318186 (WDFY3-AS2-002) 84966793-85007015 antisense
ENST00000451762 (WDFY3-AS2-001) 84967005-85011277 antisense
ENST00000624443 (WDFY3-AS2-003) 84965682-85006040 lincRNA
ENSG00000201901 (RN7SKP48)
RNA, 7SK small nuclear pseudogene 48 		ENST00000365031 (RN7SKP48-201) 85100496-85100823 misc_RNA
ENSG00000239466 (RN7SL552P)
RNA, 7SL, cytoplasmic 552, pseudogene 		ENST00000462094 (RN7SL552P-201) 84687725-84688000 misc_RNA
ENSG00000248725 (RP11-218C23.1)
 ENST00000507834 (RP11-218C23.1-001) 85246157-85246912 processed_pseudogene
ENSG00000252062 (RNU6-469P)
RNA, U6 small nuclear 469, pseudogene 		ENST00000516253 (RNU6-469P-201) 84886386-84886486 snRNA
ENSG00000265774 (AC098870.1)
 ENST00000584475 (AC098870.1-201) 85910478-85910543 miRNA
ENSG00000266421 (MIR4451)
microRNA 4451 		ENST00000580577 (MIR4451-201) 85722443-85722550 miRNA
ENSG00000273389 (RP13-514E23.2)
 ENST00000610225 (RP13-514E23.2-001) 86000327-86000766 antisense
CIL_0006J5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000043940-ENSMUSG00000057315 CGP 10090 5:101832956-102897936
GeneTranscriptPositionBiotype
ENSMUSG00000043940 (Wdfy3)
WD repeat and FYVE domain containing 3 		ENSMUST00000053177 (Wdfy3-001) 101832956-102069921 protein_coding
ENSMUST00000172512 (Wdfy3-007) 101935081-101937676 processed_transcript
ENSMUST00000172927 (Wdfy3-006) 101922817-101930853 nonsense_mediated_decay
ENSMUST00000173385 (Wdfy3-008) 101884051-101895050 protein_coding
ENSMUST00000173955 (Wdfy3-003) 101834937-101851513 retained_intron
ENSMUST00000174103 (Wdfy3-005) 101833323-101943954 protein_coding
ENSMUST00000174598 (Wdfy3-004) 101836158-101981558 protein_coding
ENSMUST00000174698 (Wdfy3-002) 101929306-102069921 protein_coding
ENSMUSG00000057315 (Arhgap24)
Rho GTPase activating protein 24 		ENSMUST00000070000 (Arhgap24-006) 102845007-102897829 protein_coding
ENSMUST00000073302 (Arhgap24-201) 102481391-102897936 protein_coding
ENSMUST00000094559 (Arhgap24-001) 102481391-102897829 protein_coding
ENSMUST00000112852 (Arhgap24-003) 102768771-102897829 protein_coding
ENSMUST00000112853 (Arhgap24-005) 102724973-102897829 protein_coding
ENSMUST00000112854 (Arhgap24-004) 102481553-102897829 protein_coding
ENSMUST00000126125 (Arhgap24-002) 102481530-102667832 retained_intron
ENSMUST00000130222 (Arhgap24-007) 102809049-102875860 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006J5_0001ENSG00000138639ENST00000264343ENST00000395183ENST00000395184ENST00000502537ENST00000503917ENST00000503995ENST00000505856ENST00000506421ENST00000509300ENST00000509709ENST00000512201ENST00000514229ENSG00000163625ENST00000295888ENST00000425179ENST00000426414ENST00000502713ENST00000504839ENST00000504990ENST00000505923ENST00000509172ENST00000509825ENST00000512267ENST00000514071ENST00000514711ENSG00000180769ENST00000318186ENST00000451762ENST00000624443ENSG00000201901ENST00000365031ENSG00000239466ENST00000462094ENSG00000248725ENST00000507834ENSG00000252062ENST00000516253ENSG00000265774ENST00000584475ENSG00000266421ENST00000580577ENSG00000273389ENST00000610225CIL_0006J5_0002ENSMUSG00000043940ENSMUST00000053177ENSMUST00000172512ENSMUST00000172927ENSMUST00000173385ENSMUST00000173955ENSMUST00000174103ENSMUST00000174598ENSMUST00000174698ENSMUSG00000057315ENSMUST00000070000ENSMUST00000073302ENSMUST00000094559ENSMUST00000112852ENSMUST00000112853ENSMUST00000112854ENSMUST00000126125ENSMUST00000130222
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006J5_0001ENSG00000138639ENST00000264343ENST00000395183ENST00000395184ENST00000502537ENST00000503917ENST00000503995ENST00000505856ENST00000506421ENST00000509300ENST00000514229ENSG00000163625ENST00000295888ENST00000425179ENST00000426414ENST00000514711ENSG00000180769ENST00000318186ENST00000451762ENST00000624443ENSG00000201901ENST00000365031ENSG00000239466ENST00000462094ENSG00000248725ENST00000507834ENSG00000252062ENST00000516253ENSG00000265774ENST00000584475ENSG00000266421ENST00000580577ENSG00000273389ENST00000610225CIL_0006J5_0002ENSMUSG00000043940ENSMUST00000053177ENSMUST00000173955ENSMUST00000174598ENSMUSG00000057315ENSMUST00000070000ENSMUST00000073302ENSMUST00000094559ENSMUST00000112852ENSMUST00000112853ENSMUST00000112854ENSMUST00000126125
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138639 ENST00000264343 N/A N/A 1.154±0.00 N/A 0.529±0.00 N/A N/A 5.446±0.00 0.496±0.00 0.475±0.00 N/A N/A N/A N/A
ENST00000395183 2.622±0.00 2.710±0.00 N/A N/A 1.394±0.51 2.970±0.00 0.836±0.00 11.325±0.00 0.756±0.07 2.076±0.59 0.223±0.04 0.746±0.20 3.505±0.51 2.123±0.00
ENST00000395184 1.508±0.00 1.700±0.00 N/A 3.411±0.00 1.942±0.00 1.090±0.00 0.683±0.34 N/A 0.243±0.00 2.272±0.00 0.353±0.00 0.665±0.36 1.259±0.19 0.554±0.10
ENST00000502537 N/A N/A 10.111±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503917 N/A N/A N/A N/A N/A N/A N/A 1.785±0.00 N/A N/A N/A N/A N/A N/A
ENST00000503995 N/A N/A N/A 1.569±0.00 2.693±0.00 N/A 1.489±0.00 1.336±0.00 2.477±0.00 4.120±0.00 N/A N/A N/A N/A
ENST00000505856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.117±0.00 N/A N/A
ENST00000506421 N/A N/A N/A N/A N/A 3.095±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509300 N/A N/A 15.450±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514229 1.992±0.00 2.742±0.00 9.335±0.00 N/A 0.909±0.00 1.270±0.00 1.537±0.14 4.342±3.69 1.194±0.64 2.697±0.74 0.641±0.10 0.976±0.04 4.113±0.91 2.383±0.00
ENSG00000163625 ENST00000295888 1.110±0.00 0.263±0.00 4.082±0.00 2.394±1.32 1.053±0.45 1.617±0.00 2.126±0.47 0.761±0.00 N/A N/A N/A 0.573±0.23 0.503±0.15 0.752±0.00
ENST00000425179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.323±0.00 4.188±0.00 N/A
ENST00000426414 N/A N/A N/A N/A N/A N/A N/A 2.202±0.00 N/A N/A N/A N/A N/A N/A
ENST00000502713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514711 N/A N/A 14.726±0.00 7.738±0.00 5.706±0.00 4.645±0.00 N/A 3.771±0.00 N/A 7.994±0.00 2.860±0.00 7.933±0.00 N/A N/A
ENSG00000180769 ENST00000318186 0.386±0.00 N/A 3.294±0.00 0.351±0.00 N/A 0.363±0.00 0.832±0.00 0.605±0.00 0.292±0.22 0.993±0.00 0.683±0.54 0.739±0.13 0.190±0.02 0.926±0.15
ENST00000451762 0.213±0.00 N/A N/A N/A N/A 0.824±0.00 0.274±0.00 0.092±0.05 0.047±0.00 N/A N/A 0.245±0.24 0.179±0.03 1.508±0.00
ENST00000624443 N/A N/A N/A N/A N/A N/A N/A N/A 0.273±0.00 N/A 0.989±0.00 N/A N/A N/A
ENSG00000201901 ENST00000365031 0.052±0.00 N/A N/A N/A N/A N/A N/A N/A 1.551±0.00 N/A N/A N/A N/A 0.050±0.00
ENSG00000239466 ENST00000462094 N/A N/A N/A N/A 1.881±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000248725 ENST00000507834 N/A N/A 0.261±0.00 0.115±0.00 N/A N/A 0.048±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000252062 ENST00000516253 N/A N/A N/A N/A 908.900±0.00 N/A 70.150±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000265774 ENST00000584475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.327±0.00
ENSG00000266421 ENST00000580577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.863±0.00
ENSG00000273389 ENST00000610225 10.847±0.00 10.593±0.00 N/A N/A 7.967±0.00 6.063±0.00 N/A 35.036±0.00 1.893±0.00 N/A 1.039±0.00 14.310±0.00 N/A 15.467±7.48
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043940 ENSMUST00000053177 N/A 1.600±0.68 1.399±0.04 8.026±2.42 1.243±0.41 2.247±1.27 0.643±0.00 2.524±0.78 0.842±0.10 2.262±0.00 N/A 2.452±0.71 2.634±1.21 1.278±0.23
ENSMUST00000172512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173955 N/A N/A N/A N/A N/A 3.848±0.33 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174598 N/A N/A 1.241±0.00 3.233±0.00 N/A N/A N/A N/A N/A N/A N/A 3.019±0.00 4.157±0.00 1.202±0.00
ENSMUST00000174698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000057315 ENSMUST00000070000 N/A N/A N/A 0.574±0.01 N/A 1.736±0.31 N/A 13.024±0.79 0.293±0.11 N/A N/A 0.600±0.00 0.639±0.06 0.148±0.00
ENSMUST00000073302 N/A N/A N/A N/A 1.689±0.00 0.758±0.00 N/A N/A 0.796±0.00 1.465±0.00 0.507±0.00 0.893±0.03 0.166±0.00 0.461±0.00
ENSMUST00000094559 3.079±0.20 0.828±0.15 2.192±0.76 0.584±0.02 1.744±0.55 1.818±0.18 0.764±0.00 N/A 1.278±0.72 1.658±0.23 0.827±0.23 1.414±0.62 0.851±0.55 0.235±0.08
ENSMUST00000112852 N/A N/A N/A 0.942±0.00 1.816±0.09 2.151±1.09 6.213±0.98 47.905±12.85 N/A 1.518±0.24 3.118±1.65 N/A 0.871±0.45 N/A
ENSMUST00000112853 2.183±0.22 2.672±1.56 2.287±0.00 0.856±0.07 1.683±0.00 3.718±1.54 1.153±0.26 N/A 1.193±0.62 2.106±0.35 0.389±0.00 2.931±0.99 1.419±0.65 0.489±0.17
ENSMUST00000112854 4.079±1.85 3.899±1.14 N/A N/A 3.345±1.48 N/A N/A N/A 0.544±0.33 2.821±1.09 0.525±0.01 1.092±0.28 0.890±0.00 0.318±0.11
ENSMUST00000126125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.135±0.00
ENSMUST00000130222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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