C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GTPase activating protein (SH3 domain) binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000138757 G3BP2 9606 - 4:75642782-75724525 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000357854 G3BP2-003 75644389-75673401 protein_coding
  ENST00000359707 G3BP2-001 75642782-75673969 protein_coding
  ENST00000395719 G3BP2-002 75642782-75673114 protein_coding
  ENST00000499709 G3BP2-015 75658852-75724470 protein_coding
  ENST00000502654 G3BP2-006 75655843-75673378 processed_transcript
  ENST00000503660 G3BP2-008 75655197-75673157 protein_coding
  ENST00000507133 G3BP2-020 75647024-75649102 retained_intron
  ENST00000507252 G3BP2-011 75657601-75672681 protein_coding
  ENST00000507701 G3BP2-007 75661515-75673350 retained_intron
  ENST00000507745 G3BP2-012 75656941-75672681 protein_coding
  ENST00000507947 G3BP2-019 75654914-75657694 retained_intron
  ENST00000508510 G3BP2-013 75658843-75724375 protein_coding
  ENST00000509100 G3BP2-009 75656991-75672927 protein_coding
  ENST00000509561 G3BP2-014 75657675-75724445 protein_coding
  ENST00000510902 G3BP2-018 75655066-75658896 nonsense_mediated_decay
  ENST00000511146 G3BP2-010 75657561-75672711 protein_coding
  ENST00000511868 G3BP2-016 75657609-75724525 protein_coding
  ENST00000513927 G3BP2-017 75656973-75673146 processed_transcript
  ENST00000515457 G3BP2-005 75657576-75673387 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357854ENST00000359707ENST00000395719ENST00000507947
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357854 N/A N/A 5.548±0.00 11.765±0.00 9.830±0.00 9.062±0.00 3.953±0.54 6.728±0.00 11.391±0.00 6.014±0.00 7.676±0.00 17.688±3.33 7.426±5.70 32.530±0.00
ENST00000359707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.875±0.00 N/A 3.868±0.00
ENST00000395719 7.122±0.00 6.616±0.00 1.772±0.00 16.438±0.00 10.629±2.84 13.404±5.62 3.392±0.00 5.111±0.00 7.762±0.00 4.590±0.00 15.423±8.75 6.467±2.99 3.003±0.94 10.007±0.20
ENST00000507947 N/A N/A N/A N/A N/A N/A N/A 9.095±0.00 N/A N/A N/A 24.478±0.00 13.666±0.00 28.288±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071L CIL_00071L_0001 CGP 4:75578005-75724525
CIL_00051O CIL_00051O_0003 CGP 4:75642782-75814286

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0006810 IEA transport
GO:0007253 NAS cytoplasmic sequestering of NF-kappaB
GO:0007265 NAS Ras protein signal transduction
GO:0030159 NAS receptor signaling complex scaffold activity
GO:0044822 IDA poly(A) RNA binding
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014790 g3bp2 GTPase activating protein (SH3 domain) binding protein 2 protein_coding Danio_rerio
ENSDARG00000092127 G3BP2 (2 of 2) GTPase activating protein (SH3 domain) binding protein 2 protein_coding Danio_rerio
ENSMUSG00000029405 G3bp2 GTPase activating protein (SH3 domain) binding protein 2 protein_coding Mus_musculus

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