C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00071L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138769-ENSG00000138757 CGP 9606 4:75578005-75724525
GeneTranscriptPositionBiotype
ENSG00000138757 (G3BP2)
GTPase activating protein (SH3 domain) binding protein 2 		ENST00000357854 (G3BP2-003) 75644389-75673401 protein_coding
ENST00000359707 (G3BP2-001) 75642782-75673969 protein_coding
ENST00000395719 (G3BP2-002) 75642782-75673114 protein_coding
ENST00000499709 (G3BP2-015) 75658852-75724470 protein_coding
ENST00000502654 (G3BP2-006) 75655843-75673378 processed_transcript
ENST00000503660 (G3BP2-008) 75655197-75673157 protein_coding
ENST00000507133 (G3BP2-020) 75647024-75649102 retained_intron
ENST00000507252 (G3BP2-011) 75657601-75672681 protein_coding
ENST00000507701 (G3BP2-007) 75661515-75673350 retained_intron
ENST00000507745 (G3BP2-012) 75656941-75672681 protein_coding
ENST00000507947 (G3BP2-019) 75654914-75657694 retained_intron
ENST00000508510 (G3BP2-013) 75658843-75724375 protein_coding
ENST00000509100 (G3BP2-009) 75656991-75672927 protein_coding
ENST00000509561 (G3BP2-014) 75657675-75724445 protein_coding
ENST00000510902 (G3BP2-018) 75655066-75658896 nonsense_mediated_decay
ENST00000511146 (G3BP2-010) 75657561-75672711 protein_coding
ENST00000511868 (G3BP2-016) 75657609-75724525 protein_coding
ENST00000513927 (G3BP2-017) 75656973-75673146 processed_transcript
ENST00000515457 (G3BP2-005) 75657576-75673387 protein_coding
ENSG00000138769 (CDKL2)
cyclin-dependent kinase-like 2 (CDC2-related kinase) 		ENST00000307465 (CDKL2-002) 75578864-75630526 protein_coding
ENST00000429927 (CDKL2-001) 75578005-75630716 protein_coding
ENST00000506234 (CDKL2-003) 75598119-75630486 nonsense_mediated_decay
ENST00000515793 (CDKL2-004) 75596080-75597140 retained_intron
CIL_00071L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029403-ENSMUSG00000029405 CGP 10090 5:92006074-92083735
GeneTranscriptPositionBiotype
ENSMUSG00000029403 (Cdkl2)
cyclin-dependent kinase-like 2 (CDC2-related kinase) 		ENSMUST00000069937 (Cdkl2-001) 92006074-92043041 protein_coding
ENSMUST00000086978 (Cdkl2-002) 92006074-92043042 protein_coding
ENSMUST00000113140 (Cdkl2-004) 92007823-92042672 protein_coding
ENSMUST00000113143 (Cdkl2-003) 92007804-92042696 protein_coding
ENSMUST00000136037 (Cdkl2-005) 92008036-92017896 retained_intron
ENSMUSG00000029405 (G3bp2)
GTPase activating protein (SH3 domain) binding protein 2 		ENSMUST00000113127 (G3bp2-201) 92052161-92083735 protein_coding
ENSMUST00000164378 (G3bp2-202) 92052146-92082917 protein_coding
ENSMUST00000167918 (G3bp2-203) 92052146-92083557 protein_coding
ENSMUST00000169094 (G3bp2-204) 92052146-92083557 protein_coding
ENSMUSG00000088712 (Gm22728)
predicted gene, 22728 		ENSMUST00000158087 (Gm22728-201) 92056064-92056192 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071L_0001ENSG00000138757ENST00000357854ENST00000359707ENST00000395719ENST00000499709ENST00000502654ENST00000503660ENST00000507133ENST00000507252ENST00000507701ENST00000507745ENST00000507947ENST00000508510ENST00000509100ENST00000509561ENST00000510902ENST00000511146ENST00000511868ENST00000513927ENST00000515457ENSG00000138769ENST00000307465ENST00000429927ENST00000506234ENST00000515793CIL_00071L_0002ENSMUSG00000029403ENSMUST00000069937ENSMUST00000086978ENSMUST00000113140ENSMUST00000113143ENSMUST00000136037ENSMUSG00000029405ENSMUST00000113127ENSMUST00000164378ENSMUST00000167918ENSMUST00000169094ENSMUSG00000088712ENSMUST00000158087
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071L_0001ENSG00000138757ENST00000357854ENST00000359707ENST00000395719ENST00000507947ENSG00000138769ENST00000307465ENST00000429927ENST00000506234ENST00000515793CIL_00071L_0002ENSMUSG00000029403ENSMUST00000069937ENSMUST00000086978ENSMUST00000113140ENSMUST00000113143ENSMUSG00000029405ENSMUST00000113127ENSMUST00000164378ENSMUST00000167918ENSMUST00000169094ENSMUSG00000088712ENSMUST00000158087
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138757 ENST00000357854 N/A N/A 5.548±0.00 11.765±0.00 9.830±0.00 9.062±0.00 3.953±0.54 6.728±0.00 11.391±0.00 6.014±0.00 7.676±0.00 17.688±3.33 7.426±5.70 32.530±0.00
ENST00000359707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.875±0.00 N/A 3.868±0.00
ENST00000395719 7.122±0.00 6.616±0.00 1.772±0.00 16.438±0.00 10.629±2.84 13.404±5.62 3.392±0.00 5.111±0.00 7.762±0.00 4.590±0.00 15.423±8.75 6.467±2.99 3.003±0.94 10.007±0.20
ENST00000499709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507947 N/A N/A N/A N/A N/A N/A N/A 9.095±0.00 N/A N/A N/A 24.478±0.00 13.666±0.00 28.288±0.00
ENST00000508510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000138769 ENST00000307465 N/A 0.026±0.00 N/A N/A 0.097±0.00 0.165±0.00 0.009±0.00 N/A 0.104±0.00 N/A N/A 0.199±0.00 0.009±0.00 5.255±1.13
ENST00000429927 N/A 0.039±0.00 0.192±0.00 N/A 0.020±0.00 0.324±0.01 N/A N/A N/A N/A 0.024±0.00 0.179±0.07 N/A 1.426±0.00
ENST00000506234 N/A N/A N/A N/A N/A N/A 0.047±0.03 N/A 0.050±0.00 N/A N/A N/A N/A 21.099±0.00
ENST00000515793 N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029403 ENSMUST00000069937 0.472±0.14 0.553±0.29 0.568±0.00 1.513±0.00 0.298±0.00 0.919±0.67 0.329±0.16 0.489±0.20 0.128±0.10 0.734±0.00 0.651±0.17 0.555±0.24 1.599±0.67 22.457±0.00
ENSMUST00000086978 0.705±0.43 0.619±0.25 1.487±0.73 1.092±0.91 0.919±0.28 0.867±0.44 0.091±0.01 0.622±0.15 0.257±0.18 1.675±0.57 0.767±0.21 0.759±0.23 1.771±0.24 15.055±1.09
ENSMUST00000113140 0.683±0.11 0.360±0.33 0.265±0.00 N/A 0.575±0.23 0.724±0.42 0.167±0.00 0.632±0.11 0.197±0.09 1.161±0.33 0.582±0.04 1.328±0.59 1.228±0.55 18.219±0.00
ENSMUST00000113143 N/A 0.649±0.26 N/A N/A 0.453±0.21 N/A N/A 0.477±0.00 0.143±0.00 0.830±0.00 N/A 0.774±0.30 0.894±0.00 5.920±0.27
ENSMUST00000136037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029405 ENSMUST00000113127 14.476±3.27 15.962±2.34 22.487±1.17 39.622±4.75 12.800±4.62 9.524±1.86 5.984±0.95 8.972±1.18 10.707±4.02 10.855±1.05 7.099±1.64 17.000±7.09 22.229±12.30 9.656±4.18
ENSMUST00000164378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.383±0.00 2.317±0.58 2.316±0.00
ENSMUST00000167918 N/A 2.863±0.16 N/A N/A N/A N/A N/A N/A 1.465±0.00 N/A 2.979±0.00 N/A N/A 2.267±0.62
ENSMUST00000169094 3.530±1.31 3.342±0.57 6.957±0.00 11.270±2.99 3.194±1.32 1.655±0.44 2.344±0.21 2.002±0.62 2.645±0.53 2.126±0.36 3.416±0.96 2.806±0.41 3.424±1.49 2.934±0.00
ENSMUSG00000088712 ENSMUST00000158087 N/A N/A 21.548±0.00 7.971±3.18 N/A N/A N/A N/A N/A 481.802±0.00 N/A 22.918±0.00 N/A N/A

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