C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GTPase activating protein (SH3 domain) binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357854 G3BP2-003 ENSG00000138757 9606 - 4:75644389-75673401 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357854
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357854 5.548±0.00 11.765±0.00 9.830±0.00 9.062±0.00 3.953±0.54 6.728±0.00 11.391±0.00 6.014±0.00 7.676±0.00 17.688±3.33 7.426±5.70 32.530±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071L CIL_00071L_0001 CGP 4:75578005-75724525
CIL_00051O CIL_00051O_0003 CGP 4:75642782-75814286

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0006810 IEA transport
GO:0007253 NAS cytoplasmic sequestering of NF-kappaB
GO:0007265 NAS Ras protein signal transduction
GO:0030159 NAS receptor signaling complex scaffold activity
GO:0044822 IDA poly(A) RNA binding
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113127 G3bp2-201 protein_coding Mus_musculus 0 3166
ENSMUST00000167918 G3bp2-203 protein_coding Mus_musculus 0 3103
ENSMUST00000164378 G3bp2-202 protein_coding Mus_musculus 0 2012
ENSMUST00000169094 G3bp2-204 protein_coding Mus_musculus 0 2012

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