C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: copine VIII
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139117 CPNE8 9606 - 12:38646822-38907430 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331366 CPNE8-001 38652185-38905631 protein_coding
  ENST00000360449 CPNE8-002 38653834-38907430 protein_coding
  ENST00000538596 CPNE8-003 38652358-38721222 protein_coding
  ENST00000546603 CPNE8-006 38653371-38679678 processed_transcript
  ENST00000547417 CPNE8-007 38653962-38670995 processed_transcript
  ENST00000549842 CPNE8-004 38670757-38685694 processed_transcript
  ENST00000550863 CPNE8-009 38767691-38906269 protein_coding
  ENST00000551855 CPNE8-008 38726359-38767717 processed_transcript
  ENST00000552259 CPNE8-005 38646822-38679622 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331366ENST00000360449ENST00000538596ENST00000549842ENST00000550863
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331366 3.616±0.00 0.735±0.00 N/A 1.343±0.49 1.757±0.35 2.334±1.27 0.915±0.51 2.407±1.13 1.212±0.59 2.283±0.35 0.318±0.00 1.345±0.93 1.932±0.39 1.704±0.00
ENST00000360449 1.616±0.00 N/A N/A 1.573±0.15 N/A N/A N/A N/A N/A N/A 0.272±0.00 N/A N/A 0.748±0.00
ENST00000538596 N/A 0.941±0.00 N/A N/A 1.301±0.00 N/A N/A 2.742±0.00 0.940±0.00 4.530±0.00 1.048±0.00 0.469±0.00 N/A 0.692±0.00
ENST00000549842 N/A N/A 4.086±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.319±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00017A CIL_00017A_0001 CGP 12:38316578-38907430
CIL_0006HL CIL_0006HL_0001 CGP 12:38646822-39443390

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025189 cpne8 copine VIII protein_coding Danio_rerio
ENSDARG00000037926 copine VIII protein_coding Danio_rerio
ENSMUSG00000052560 Cpne8 copine VIII protein_coding Mus_musculus

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