C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00017A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175548-ENSG00000139117 CGP 9606 12:38316578-38907430
GeneTranscriptPositionBiotype
ENSG00000139117 (CPNE8)
copine VIII 		ENST00000331366 (CPNE8-001) 38652185-38905631 protein_coding
ENST00000360449 (CPNE8-002) 38653834-38907430 protein_coding
ENST00000538596 (CPNE8-003) 38652358-38721222 protein_coding
ENST00000546603 (CPNE8-006) 38653371-38679678 processed_transcript
ENST00000547417 (CPNE8-007) 38653962-38670995 processed_transcript
ENST00000549842 (CPNE8-004) 38670757-38685694 processed_transcript
ENST00000550863 (CPNE8-009) 38767691-38906269 protein_coding
ENST00000551855 (CPNE8-008) 38726359-38767717 processed_transcript
ENST00000552259 (CPNE8-005) 38646822-38679622 processed_transcript
ENSG00000175548 (ALG10B)
ALG10B, alpha-1,2-glucosyltransferase 		ENST00000308742 (ALG10B-001) 38316578-38329728 protein_coding
ENST00000548240 (ALG10B-004) 38316839-38321327 nonsense_mediated_decay
ENST00000551464 (ALG10B-003) 38316762-38323982 protein_coding
ENST00000553138 (ALG10B-002) 38316767-38320450 retained_intron
ENSG00000257645 (RP11-804F13.2)
 ENST00000550134 (RP11-804F13.2-001) 38532895-38533050 processed_pseudogene
ENSG00000257718 (RP11-396F22.1)
 ENST00000551152 (RP11-396F22.1-001) 38906451-38909592 antisense
CIL_00017A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000075470-ENSMUSG00000052560 CGP 10090 15:90224311-90679432
GeneTranscriptPositionBiotype
ENSMUSG00000052560 (Cpne8)
copine VIII 		ENSMUST00000014777 (Cpne8-002) 90643326-90679388 protein_coding
ENSMUST00000064391 (Cpne8-001) 90487483-90679432 protein_coding
ENSMUST00000088649 (Cpne8-003) 90487482-90679371 nonsense_mediated_decay
ENSMUST00000140171 (Cpne8-005) 90643329-90649438 processed_transcript
ENSMUST00000154569 (Cpne8-004) 90648233-90679376 retained_intron
ENSMUSG00000075470 (Alg10b)
asparagine-linked glycosylation 10B (alpha-1,2-glucosyltransferase) 		ENSMUST00000100309 (Alg10b-201) 90224311-90230554 protein_coding
ENSMUSG00000078847 (Gm6746)
predicted pseudogene 6746 		ENSMUST00000108774 (Gm6746-001) 90561347-90561829 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00017A_0001ENSG00000139117ENST00000331366ENST00000360449ENST00000538596ENST00000546603ENST00000547417ENST00000549842ENST00000550863ENST00000551855ENST00000552259ENSG00000175548ENST00000308742ENST00000548240ENST00000551464ENST00000553138ENSG00000257645ENST00000550134ENSG00000257718ENST00000551152CIL_00017A_0002ENSMUSG00000052560ENSMUST00000014777ENSMUST00000064391ENSMUST00000088649ENSMUST00000140171ENSMUST00000154569ENSMUSG00000075470ENSMUST00000100309ENSMUSG00000078847ENSMUST00000108774
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00017A_0001ENSG00000139117ENST00000331366ENST00000360449ENST00000538596ENST00000549842ENST00000550863ENSG00000175548ENST00000308742ENSG00000257645ENST00000550134ENSG00000257718ENST00000551152CIL_00017A_0002ENSMUSG00000052560ENSMUST00000014777ENSMUST00000064391ENSMUST00000088649ENSMUST00000140171ENSMUST00000154569ENSMUSG00000075470ENSMUST00000100309ENSMUSG00000078847ENSMUST00000108774
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139117 ENST00000331366 3.616±0.00 0.735±0.00 N/A 1.343±0.49 1.757±0.35 2.334±1.27 0.915±0.51 2.407±1.13 1.212±0.59 2.283±0.35 0.318±0.00 1.345±0.93 1.932±0.39 1.704±0.00
ENST00000360449 1.616±0.00 N/A N/A 1.573±0.15 N/A N/A N/A N/A N/A N/A 0.272±0.00 N/A N/A 0.748±0.00
ENST00000538596 N/A 0.941±0.00 N/A N/A 1.301±0.00 N/A N/A 2.742±0.00 0.940±0.00 4.530±0.00 1.048±0.00 0.469±0.00 N/A 0.692±0.00
ENST00000546603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549842 N/A N/A 4.086±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.319±0.00 N/A N/A N/A
ENST00000551855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175548 ENST00000308742 N/A N/A 0.490±0.00 0.773±0.00 0.972±0.00 0.442±0.25 0.457±0.05 0.258±0.10 N/A 0.245±0.00 0.041±0.00 0.472±0.26 0.329±0.13 0.410±0.00
ENST00000548240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257645 ENST00000550134 N/A N/A N/A 7.049±0.00 N/A 0.093±0.00 N/A N/A N/A N/A 28.864±0.00 N/A N/A 0.654±0.00
ENSG00000257718 ENST00000551152 0.928±0.00 N/A 0.178±0.00 0.114±0.00 0.890±0.00 0.932±0.00 0.061±0.00 0.563±0.03 0.592±0.50 N/A N/A 0.461±0.29 0.436±0.09 2.566±0.38
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000052560 ENSMUST00000014777 9.873±2.72 2.150±0.96 10.244±1.14 3.684±0.51 6.969±1.72 8.214±1.78 3.171±0.38 4.645±1.18 1.942±0.47 6.995±1.72 1.401±0.52 3.888±2.06 5.274±2.14 1.396±0.82
ENSMUST00000064391 1.571±0.94 0.634±0.09 2.477±0.19 1.544±0.40 1.331±0.20 1.434±0.71 0.940±0.30 0.921±0.33 0.263±0.12 2.274±0.74 0.395±0.14 1.534±0.41 0.512±0.16 0.399±0.29
ENSMUST00000088649 2.917±1.35 1.232±0.16 1.309±0.15 N/A 3.699±1.41 2.570±0.89 0.799±0.00 1.068±0.41 0.288±0.12 4.968±1.23 0.231±0.12 1.419±0.43 N/A 0.731±0.35
ENSMUST00000140171 9.407±4.52 1.929±0.26 N/A N/A 6.353±1.20 8.791±0.00 N/A 7.253±2.47 1.767±0.67 5.487±0.00 1.500±0.18 4.943±3.41 2.456±0.31 1.714±0.13
ENSMUST00000154569 N/A 4.472±1.11 N/A N/A N/A 10.895±2.58 N/A N/A N/A N/A N/A 7.708±2.70 N/A N/A
ENSMUSG00000075470 ENSMUST00000100309 4.354±0.93 17.140±2.78 N/A 2.319±0.00 7.185±1.86 6.998±0.60 2.814±1.52 5.976±3.00 7.850±0.79 6.442±2.74 N/A 16.004±4.86 1.535±0.64 1.558±0.76
ENSMUSG00000078847 ENSMUST00000108774 0.286±0.04 N/A 0.097±0.00 0.035±0.01 0.146±0.01 N/A N/A 0.312±0.00 N/A 0.137±0.00 N/A 0.538±0.12 N/A 0.325±0.32

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