C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006HL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139117-ENSG00000139116 CGP 9606 12:38646822-39443390
GeneTranscriptPositionBiotype
ENSG00000139116 (KIF21A)
kinesin family member 21A 		ENST00000361418 (KIF21A-003) 39294421-39442986 protein_coding
ENST00000361961 (KIF21A-001) 39293229-39443390 protein_coding
ENST00000541463 (KIF21A-008) 39294424-39442970 protein_coding
ENST00000544797 (KIF21A-002) 39294387-39443059 protein_coding
ENST00000546817 (KIF21A-011) 39333037-39337541 retained_intron
ENST00000547108 (KIF21A-006) 39319982-39340247 nonsense_mediated_decay
ENST00000547733 (KIF21A-007) 39293228-39312826 retained_intron
ENST00000547745 (KIF21A-014) 39309752-39321648 processed_transcript
ENST00000550429 (KIF21A-010) 39356600-39357287 retained_intron
ENST00000551066 (KIF21A-013) 39330052-39332327 protein_coding
ENST00000551264 (KIF21A-005) 39293231-39332408 protein_coding
ENST00000552475 (KIF21A-012) 39319990-39332024 processed_transcript
ENST00000552908 (KIF21A-009) 39357251-39367927 protein_coding
ENST00000552961 (KIF21A-004) 39293231-39341058 protein_coding
ENSG00000139117 (CPNE8)
copine VIII 		ENST00000331366 (CPNE8-001) 38652185-38905631 protein_coding
ENST00000360449 (CPNE8-002) 38653834-38907430 protein_coding
ENST00000538596 (CPNE8-003) 38652358-38721222 protein_coding
ENST00000546603 (CPNE8-006) 38653371-38679678 processed_transcript
ENST00000547417 (CPNE8-007) 38653962-38670995 processed_transcript
ENST00000549842 (CPNE8-004) 38670757-38685694 processed_transcript
ENST00000550863 (CPNE8-009) 38767691-38906269 protein_coding
ENST00000551855 (CPNE8-008) 38726359-38767717 processed_transcript
ENST00000552259 (CPNE8-005) 38646822-38679622 processed_transcript
ENSG00000257718 (RP11-396F22.1)
 ENST00000551152 (RP11-396F22.1-001) 38906451-38909592 antisense
ENSG00000258144 (RP11-554L12.1)
 ENST00000553029 (RP11-554L12.1-001) 39087713-39092874 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0006HL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000052560-ENSMUSG00000022629 CGP 10090 15:90487482-91049948
GeneTranscriptPositionBiotype
ENSMUSG00000022629 (Kif21a)
kinesin family member 21A 		ENSMUST00000067205 (Kif21a-201) 90933276-91049948 protein_coding
ENSMUST00000088614 (Kif21a-202) 90933276-91049948 protein_coding
ENSMUST00000100304 (Kif21a-203) 90933276-91049948 protein_coding
ENSMUST00000109287 (Kif21a-204) 90933276-91049948 protein_coding
ENSMUST00000109288 (Kif21a-205) 90933276-91049948 protein_coding
ENSMUSG00000052560 (Cpne8)
copine VIII 		ENSMUST00000014777 (Cpne8-002) 90643326-90679388 protein_coding
ENSMUST00000064391 (Cpne8-001) 90487483-90679432 protein_coding
ENSMUST00000088649 (Cpne8-003) 90487482-90679371 nonsense_mediated_decay
ENSMUST00000140171 (Cpne8-005) 90643329-90649438 processed_transcript
ENSMUST00000154569 (Cpne8-004) 90648233-90679376 retained_intron
ENSMUSG00000067869 (Tcea1-ps1)
transcription elongation factor A (SII) 1, pseudogene 1 		ENSMUST00000117942 (Tcea1-ps1-001) 90882615-90883518 processed_pseudogene
ENSMUSG00000067870 (Rpl31-ps8)
ribosomal protein L31, pseudogene 8 		ENSMUST00000181935 (Rpl31-ps8-001) 90764279-90764656 processed_pseudogene
ENSMUSG00000078847 (Gm6746)
predicted pseudogene 6746 		ENSMUST00000108774 (Gm6746-001) 90561347-90561829 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006HL_0001ENSG00000139116ENST00000361418ENST00000361961ENST00000541463ENST00000544797ENST00000546817ENST00000547108ENST00000547733ENST00000547745ENST00000550429ENST00000551066ENST00000551264ENST00000552475ENST00000552908ENST00000552961ENSG00000139117ENST00000331366ENST00000360449ENST00000538596ENST00000546603ENST00000547417ENST00000549842ENST00000550863ENST00000551855ENST00000552259ENSG00000257718ENST00000551152ENSG00000258144ENST00000553029CIL_0006HL_0002ENSMUSG00000022629ENSMUST00000067205ENSMUST00000088614ENSMUST00000100304ENSMUST00000109287ENSMUST00000109288ENSMUSG00000052560ENSMUST00000014777ENSMUST00000064391ENSMUST00000088649ENSMUST00000140171ENSMUST00000154569ENSMUSG00000067869ENSMUST00000117942ENSMUSG00000067870ENSMUST00000181935ENSMUSG00000078847ENSMUST00000108774
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006HL_0001ENSG00000139116ENST00000361418ENST00000361961ENST00000541463ENST00000544797ENST00000547108ENST00000547733ENST00000551264ENST00000552908ENST00000552961ENSG00000139117ENST00000331366ENST00000360449ENST00000538596ENST00000549842ENST00000550863ENSG00000257718ENST00000551152ENSG00000258144ENST00000553029CIL_0006HL_0002ENSMUSG00000022629ENSMUST00000067205ENSMUST00000088614ENSMUST00000100304ENSMUST00000109287ENSMUST00000109288ENSMUSG00000052560ENSMUST00000014777ENSMUST00000064391ENSMUST00000088649ENSMUST00000140171ENSMUST00000154569ENSMUSG00000067869ENSMUST00000117942ENSMUSG00000067870ENSMUST00000181935ENSMUSG00000078847ENSMUST00000108774
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139116 ENST00000361418 N/A N/A N/A 4.816±0.00 N/A N/A 1.191±0.44 N/A N/A N/A N/A N/A N/A 1.650±1.16
ENST00000361961 N/A N/A N/A 6.234±3.30 N/A 1.184±0.00 0.650±0.00 N/A 0.682±0.00 N/A 0.385±0.00 0.292±0.00 5.338±0.00 N/A
ENST00000541463 0.591±0.00 N/A 0.906±0.00 N/A N/A 0.785±0.34 N/A 1.766±0.00 1.265±0.00 N/A N/A 0.191±0.00 N/A N/A
ENST00000544797 N/A N/A 1.457±0.00 N/A N/A N/A N/A N/A N/A 0.969±0.00 N/A 1.604±0.00 N/A N/A
ENST00000546817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547108 N/A N/A N/A N/A N/A N/A N/A N/A 0.827±0.00 1.040±0.00 N/A N/A N/A N/A
ENST00000547733 N/A N/A N/A N/A N/A N/A N/A 1.618±0.00 1.142±0.00 N/A N/A N/A N/A N/A
ENST00000547745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551264 N/A N/A 3.414±0.00 7.081±2.49 1.092±0.66 0.634±0.00 N/A 2.264±0.72 2.120±0.00 2.461±0.12 0.320±0.00 1.216±0.35 0.969±0.48 1.797±0.00
ENST00000552475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.923±0.00 N/A N/A N/A
ENST00000552961 0.767±0.00 0.260±0.00 N/A 7.427±0.00 0.496±0.00 0.932±0.00 2.771±0.00 2.498±0.00 0.831±0.00 N/A 0.855±0.00 0.986±0.58 N/A N/A
ENSG00000139117 ENST00000331366 3.616±0.00 0.735±0.00 N/A 1.343±0.49 1.757±0.35 2.334±1.27 0.915±0.51 2.407±1.13 1.212±0.59 2.283±0.35 0.318±0.00 1.345±0.93 1.932±0.39 1.704±0.00
ENST00000360449 1.616±0.00 N/A N/A 1.573±0.15 N/A N/A N/A N/A N/A N/A 0.272±0.00 N/A N/A 0.748±0.00
ENST00000538596 N/A 0.941±0.00 N/A N/A 1.301±0.00 N/A N/A 2.742±0.00 0.940±0.00 4.530±0.00 1.048±0.00 0.469±0.00 N/A 0.692±0.00
ENST00000546603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549842 N/A N/A 4.086±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.319±0.00 N/A N/A N/A
ENST00000551855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257718 ENST00000551152 0.928±0.00 N/A 0.178±0.00 0.114±0.00 0.890±0.00 0.932±0.00 0.061±0.00 0.563±0.03 0.592±0.50 N/A N/A 0.461±0.29 0.436±0.09 2.566±0.38
ENSG00000258144 ENST00000553029 N/A N/A N/A 0.060±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.164±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022629 ENSMUST00000067205 N/A 0.383±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000088614 0.343±0.01 0.542±0.11 N/A 5.452±1.00 0.393±0.00 2.191±0.81 0.460±0.00 N/A 0.216±0.00 1.098±0.12 N/A N/A N/A N/A
ENSMUST00000100304 N/A N/A N/A N/A N/A N/A N/A N/A 1.023±0.27 0.697±0.00 N/A 1.844±0.00 N/A N/A
ENSMUST00000109287 0.445±0.00 1.823±0.00 0.540±0.00 20.531±8.52 0.387±0.03 2.202±0.00 0.492±0.08 2.580±0.87 0.573±0.30 0.866±0.06 0.473±0.10 7.292±3.69 0.772±0.37 0.599±0.11
ENSMUST00000109288 0.710±0.27 2.286±1.05 0.425±0.02 7.005±0.75 1.451±1.33 2.311±1.05 N/A 2.518±0.56 1.247±0.91 2.015±0.62 0.747±0.02 5.025±1.78 2.306±2.41 2.289±2.20
ENSMUSG00000052560 ENSMUST00000014777 9.873±2.72 2.150±0.96 10.244±1.14 3.684±0.51 6.969±1.72 8.214±1.78 3.171±0.38 4.645±1.18 1.942±0.47 6.995±1.72 1.401±0.52 3.888±2.06 5.274±2.14 1.396±0.82
ENSMUST00000064391 1.571±0.94 0.634±0.09 2.477±0.19 1.544±0.40 1.331±0.20 1.434±0.71 0.940±0.30 0.921±0.33 0.263±0.12 2.274±0.74 0.395±0.14 1.534±0.41 0.512±0.16 0.399±0.29
ENSMUST00000088649 2.917±1.35 1.232±0.16 1.309±0.15 N/A 3.699±1.41 2.570±0.89 0.799±0.00 1.068±0.41 0.288±0.12 4.968±1.23 0.231±0.12 1.419±0.43 N/A 0.731±0.35
ENSMUST00000140171 9.407±4.52 1.929±0.26 N/A N/A 6.353±1.20 8.791±0.00 N/A 7.253±2.47 1.767±0.67 5.487±0.00 1.500±0.18 4.943±3.41 2.456±0.31 1.714±0.13
ENSMUST00000154569 N/A 4.472±1.11 N/A N/A N/A 10.895±2.58 N/A N/A N/A N/A N/A 7.708±2.70 N/A N/A
ENSMUSG00000067869 ENSMUST00000117942 0.063±0.01 N/A 0.105±0.08 0.589±0.73 0.352±0.00 0.326±0.14 0.048±0.00 0.101±0.06 0.168±0.12 0.160±0.02 0.062±0.03 0.045±0.02 0.063±0.05 0.560±0.67
ENSMUSG00000067870 ENSMUST00000181935 3.810±0.90 N/A 30.915±26.19 41.332±38.26 1.530±0.13 0.562±0.34 0.676±0.20 0.344±0.23 160.329±173.94 0.467±0.29 1.152±0.87 3.317±1.33 0.403±0.32 0.436±0.27
ENSMUSG00000078847 ENSMUST00000108774 0.286±0.04 N/A 0.097±0.00 0.035±0.01 0.146±0.01 N/A N/A 0.312±0.00 N/A 0.137±0.00 N/A 0.538±0.12 N/A 0.325±0.32

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