C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 117
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139173 TMEM117 9606 + 12:43835967-44389762 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000266534 TMEM117-001 43836098-44389758 protein_coding
  ENST00000546387 TMEM117-005 43835967-43844984 retained_intron
  ENST00000546868 TMEM117-002 43836153-44389762 nonsense_mediated_decay
  ENST00000546978 TMEM117-003 44318295-44389760 processed_transcript
  ENST00000550495 TMEM117-006 43844851-44388035 protein_coding
  ENST00000550623 TMEM117-007 44073651-44376656 processed_transcript
  ENST00000551577 TMEM117-004 43836083-44389758 protein_coding
  ENST00000553253 TMEM117-008 44073512-44376724 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000266534ENST00000546387ENST00000546868ENST00000546978ENST00000550495ENST00000551577
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000266534 0.896±0.00 0.339±0.00 N/A 0.780±0.15 0.760±0.00 1.330±0.00 0.774±0.34 0.353±0.03 0.312±0.00 N/A N/A 1.298±0.42 1.288±0.10 1.506±0.00
ENST00000546387 N/A N/A 0.463±0.00 N/A N/A N/A N/A N/A N/A 0.312±0.00 0.966±0.00 N/A N/A N/A
ENST00000546868 N/A 0.557±0.00 N/A 0.656±0.45 N/A N/A N/A N/A N/A N/A N/A 0.357±0.09 N/A N/A
ENST00000546978 0.142±0.00 0.728±0.00 N/A 0.583±0.00 0.336±0.00 0.468±0.00 N/A 0.638±0.00 0.470±0.00 0.150±0.05 0.309±0.00 1.050±0.00 0.361±0.09 0.816±0.00
ENST00000550495 N/A N/A N/A N/A N/A N/A N/A N/A 3.576±0.00 N/A N/A N/A N/A N/A
ENST00000551577 N/A 0.173±0.00 0.487±0.00 0.424±0.00 0.474±0.00 N/A 0.702±0.00 0.585±0.00 0.551±0.00 0.422±0.00 N/A 0.666±0.00 N/A 0.882±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R8 CIL_0006R8_0001 CGP 12:43793723-44389762
CIL_0006R7 CIL_0006R7_0001 CGP 12:43835967-44921848

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005783 IDA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079797 TMEM117 (1 of 2) transmembrane protein 117 protein_coding Danio_rerio
ENSMUSG00000063296 Tmem117 transmembrane protein 117 protein_coding Mus_musculus

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