C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adhesion molecule with Ig-like domain 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139211 AMIGO2 9606 - 12:47075707-47079951 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000266581 AMIGO2-003 47075707-47079865 protein_coding
  ENST00000429635 AMIGO2-001 47076600-47079951 protein_coding
  ENST00000550413 AMIGO2-002 47076498-47079642 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000266581ENST00000429635ENST00000550413
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000266581 N/A N/A 0.880±0.00 0.566±0.00 N/A 0.538±0.00 N/A N/A N/A N/A N/A 4.540±0.00 N/A N/A
ENST00000429635 2.348±0.00 7.537±0.00 N/A 0.840±0.00 3.895±1.94 3.419±2.24 0.671±0.00 2.957±0.00 1.023±0.61 2.020±1.20 N/A 8.346±0.00 2.855±0.00 3.704±0.00
ENST00000550413 2.287±0.00 N/A N/A 0.835±0.00 1.594±0.00 3.148±0.00 0.388±0.30 0.377±0.00 1.280±0.51 N/A 0.228±0.00 9.392±5.55 4.819±2.47 4.605±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YP CIL_0005YP_0001 CGP 12:46764761-47079951
CIL_0005YQ CIL_0005YQ_0001 CGP 12:47075707-47236662

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005886 IEA plasma membrane
GO:0007156 ISS homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 ISS heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016021 IEA integral component of membrane
GO:0043066 IEA negative regulation of apoptotic process
GO:0043069 ISS negative regulation of programmed cell death

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000048218 Amigo2 adhesion molecule with Ig like domain 2 protein_coding Mus_musculus

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