C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adhesion molecule with Ig-like domain 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000429635 AMIGO2-001 ENSG00000139211 9606 - 12:47076600-47079951 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000429635
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000429635 2.348±0.00 7.537±0.00 0.840±0.00 3.895±1.94 3.419±2.24 0.671±0.00 2.957±0.00 1.023±0.61 2.020±1.20 8.346±0.00 2.855±0.00 3.704±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YP CIL_0005YP_0001 CGP 12:46764761-47079951
CIL_0005YQ CIL_0005YQ_0001 CGP 12:47075707-47236662

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005886 IEA plasma membrane
GO:0007156 ISS homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007157 ISS heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016021 IEA integral component of membrane
GO:0043069 ISS negative regulation of programmed cell death

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053106 Amigo2-201 protein_coding Mus_musculus 0 1511

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