C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005YQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139211-ENSG00000179715 CGP 9606 12:47075707-47236662
GeneTranscriptPositionBiotype
ENSG00000139211 (AMIGO2)
adhesion molecule with Ig-like domain 2 		ENST00000266581 (AMIGO2-003) 47075707-47079865 protein_coding
ENST00000429635 (AMIGO2-001) 47076600-47079951 protein_coding
ENST00000550413 (AMIGO2-002) 47076498-47079642 protein_coding
ENSG00000179715 (PCED1B)
PC-esterase domain containing 1B 		ENST00000432328 (PCED1B-201) 47079603-47236662 protein_coding
ENST00000546455 (PCED1B-001) 47079603-47236660 protein_coding
ENST00000548348 (PCED1B-003) 47216587-47235992 protein_coding
ENST00000549500 (PCED1B-004) 47216598-47235565 protein_coding
ENST00000549630 (PCED1B-005) 47223501-47235566 protein_coding
ENST00000551777 (PCED1B-006) 47223545-47235238 protein_coding
ENSG00000247774 (PCED1B-AS1)
PCED1B antisense RNA 1 		ENST00000500365 (PCED1B-AS1-001) 47208420-47216435 retained_intron
ENST00000547600 (PCED1B-AS1-002) 47205898-47216434 lincRNA
ENST00000547626 (PCED1B-AS1-005) 47205898-47209374 lincRNA
ENST00000547851 (PCED1B-AS1-003) 47206379-47216434 lincRNA
ENST00000548222 (PCED1B-AS1-010) 47205902-47216249 lincRNA
ENST00000550426 (PCED1B-AS1-011) 47205898-47216200 lincRNA
ENST00000551432 (PCED1B-AS1-006) 47205899-47210737 lincRNA
ENST00000551898 (PCED1B-AS1-004) 47205901-47216200 lincRNA
ENST00000552269 (PCED1B-AS1-009) 47205898-47216408 lincRNA
ENST00000552975 (PCED1B-AS1-008) 47205941-47216456 lincRNA
ENST00000552990 (PCED1B-AS1-007) 47205901-47216444 lincRNA
ENSG00000258352 (RP11-23J18.1)
 ENST00000548463 (RP11-23J18.1-002) 47135762-47138370 processed_transcript
ENST00000553227 (RP11-23J18.1-001) 47135498-47135901 transcribed_processed_pseudogene
CIL_0005YQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048218-ENSMUSG00000044250 CGP 10090 15:97244074-97385689
GeneTranscriptPositionBiotype
ENSMUSG00000044250 (Pced1b)
PC-esterase domain containing 1B 		ENSMUST00000059433 (Pced1b-201) 97247107-97385689 protein_coding
ENSMUSG00000048218 (Amigo2)
adhesion molecule with Ig like domain 2 		ENSMUST00000053106 (Amigo2-201) 97244074-97247287 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YQ_0001ENSG00000139211ENST00000266581ENST00000429635ENST00000550413ENSG00000179715ENST00000432328ENST00000546455ENST00000548348ENST00000549500ENST00000549630ENST00000551777ENSG00000247774ENST00000500365ENST00000547600ENST00000547626ENST00000547851ENST00000548222ENST00000550426ENST00000551432ENST00000551898ENST00000552269ENST00000552975ENST00000552990ENSG00000258352ENST00000548463ENST00000553227CIL_0005YQ_0002ENSMUSG00000044250ENSMUST00000059433ENSMUSG00000048218ENSMUST00000053106
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YQ_0001ENSG00000139211ENST00000266581ENST00000429635ENST00000550413ENSG00000179715ENST00000432328ENSG00000247774ENST00000500365ENST00000547626ENST00000551432ENSG00000258352ENST00000548463ENST00000553227CIL_0005YQ_0002ENSMUSG00000044250ENSMUST00000059433ENSMUSG00000048218ENSMUST00000053106
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139211 ENST00000266581 N/A N/A 0.880±0.00 0.566±0.00 N/A 0.538±0.00 N/A N/A N/A N/A N/A 4.540±0.00 N/A N/A
ENST00000429635 2.348±0.00 7.537±0.00 N/A 0.840±0.00 3.895±1.94 3.419±2.24 0.671±0.00 2.957±0.00 1.023±0.61 2.020±1.20 N/A 8.346±0.00 2.855±0.00 3.704±0.00
ENST00000550413 2.287±0.00 N/A N/A 0.835±0.00 1.594±0.00 3.148±0.00 0.388±0.30 0.377±0.00 1.280±0.51 N/A 0.228±0.00 9.392±5.55 4.819±2.47 4.605±0.77
ENSG00000179715 ENST00000432328 3.014±0.00 25.213±0.00 N/A N/A N/A N/A N/A N/A N/A 5.541±4.03 0.327±0.00 N/A 4.548±0.58 5.428±0.05
ENST00000546455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000247774 ENST00000500365 N/A N/A 0.373±0.00 N/A N/A N/A 0.142±0.00 0.538±0.00 N/A 0.831±0.00 N/A N/A N/A N/A
ENST00000547600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.591±0.00 N/A
ENST00000547851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.575±0.00 N/A N/A N/A
ENST00000551898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258352 ENST00000548463 0.101±0.00 N/A N/A 0.176±0.00 0.436±0.00 N/A N/A N/A N/A 1.523±0.00 N/A 1.383±0.00 0.165±0.02 N/A
ENST00000553227 0.213±0.00 3.923±0.00 N/A N/A 0.646±0.00 0.255±0.14 0.558±0.00 0.058±0.00 0.049±0.00 1.618±0.00 0.047±0.00 1.237±0.82 0.395±0.00 0.278±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000044250 ENSMUST00000059433 2.451±0.93 5.801±2.43 5.924±0.32 1.404±0.49 8.046±3.54 0.910±0.30 0.637±0.17 1.009±0.37 1.481±0.68 6.023±2.94 0.465±0.18 5.583±2.22 7.156±0.24 1.241±0.63
ENSMUSG00000048218 ENSMUST00000053106 2.284±0.00 N/A 2.093±0.80 1.269±0.42 1.465±0.00 0.324±0.04 0.553±0.13 0.529±0.10 0.621±0.25 3.171±0.05 0.421±0.12 2.485±0.68 1.335±0.47 0.802±0.08

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