C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane and tetratricopeptide repeat containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139324 TMTC3 9606 + 12:88142296-88199887 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000266712 TMTC3-001 88142296-88199887 protein_coding
  ENST00000547034 TMTC3-002 88142296-88188908 nonsense_mediated_decay
  ENST00000549011 TMTC3-004 88142296-88154324 protein_coding
  ENST00000551088 TMTC3-003 88142307-88160710 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000266712ENST00000547034
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000266712 2.868±0.00 0.279±0.00 1.226±0.00 1.982±0.85 1.241±0.00 1.356±0.57 0.681±0.49 0.567±0.00 2.473±1.08 1.950±0.50 0.544±0.00 2.366±1.57 1.519±0.44 1.306±0.12
ENST00000547034 N/A N/A 0.717±0.00 N/A 2.548±0.00 1.558±0.00 N/A N/A N/A 2.237±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000212 CIL_000212_0002 CGP 12:88049014-88199887

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0009791 IEA post-embryonic development
GO:0010468 IEA regulation of gene expression
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0030324 IEA lung development
GO:0048286 IEA lung alveolus development
GO:0048747 IEA muscle fiber development
GO:0060447 IEA bud outgrowth involved in lung branching

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062846 tmtc3 transmembrane and tetratricopeptide repeat containing 3 protein_coding Danio_rerio
ENSMUSG00000036676 Tmtc3 transmembrane and tetratricopeptide repeat containing 3 protein_coding Mus_musculus

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