C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane and tetratricopeptide repeat containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000547034 TMTC3-002 ENSG00000139324 9606 + 12:88142296-88188908 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLungENST00000547034
Transcript ID Bladder Breast Colon Lung
ENST00000547034 0.717±0.00 2.548±0.00 1.558±0.00 2.237±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000212 CIL_000212_0002 CGP 12:88049014-88199887

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099318 Tmtc3-002 protein_coding Mus_musculus 0 1199
ENSMUST00000058154 Tmtc3-001 protein_coding Mus_musculus 0 1199
ENSMUST00000118505 Gm6645-001 processed_pseudogene Mus_musculus 0 676
ENSMUST00000128009 Tmtc3-005 protein_coding Mus_musculus 0 342
ENSMUST00000130883 Tmtc3-003 retained_intron Mus_musculus 0 259

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