C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vacuolar protein sorting 37 homolog B (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139722 VPS37B 9606 - 12:122865328-122896444 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000267202 VPS37B-001 122865328-122896444 protein_coding
  ENST00000371248 VPS37B-004 122867415-122890159 protein_coding
  ENST00000535765 VPS37B-003 122867154-122896127 protein_coding
  ENST00000543590 VPS37B-002 122870075-122871681 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000267202ENST00000371248ENST00000535765
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000267202 6.338±0.00 9.631±0.00 1.129±0.00 3.479±2.27 6.939±0.00 4.168±1.44 2.663±2.25 5.389±5.04 11.569±0.00 0.375±0.05 13.257±9.10 10.962±2.04 8.953±0.11
ENST00000371248 N/A N/A 2.024±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535765 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.926±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0001 VISTA 12:122762377-123367178
CIL_0002PB CIL_0002PB_0001 CGP 12:122834453-122896444
CIL_00006P CIL_00006P_0002 CGP 12:122865328-122981649

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000813 IDA ESCRT I complex
GO:0005515 IPI protein binding
GO:0010008 TAS endosome membrane
GO:0015031 IEA protein transport
GO:0016032 TAS viral process
GO:0016197 TAS endosomal transport
GO:0019058 TAS viral life cycle
GO:0019068 TAS virion assembly
GO:0019082 TAS viral protein processing
GO:0030496 IDA midbody
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome
GO:0075733 TAS intracellular transport of virus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028391 VPS37B (1 of 2) vacuolar protein sorting 37 homolog B (S. cerevisiae) protein_coding Danio_rerio
ENSDARG00000039319 vps37b vacuolar protein sorting 37 homolog B (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000066278 Vps37b vacuolar protein sorting 37B (yeast) protein_coding Mus_musculus

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