C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002PB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130787-ENSG00000139722 CGP 9606 12:122834453-122896444
GeneTranscriptPositionBiotype
ENSG00000130787 (HIP1R)
huntingtin interacting protein 1 related
ENST00000253083 (HIP1R-001) 122835426-122862960 protein_coding
ENST00000452196 (HIP1R-003) 122835481-122857384 retained_intron
ENST00000535012 (HIP1R-010) 122860165-122862084 protein_coding
ENST00000535831 (HIP1R-004) 122834453-122858017 retained_intron
ENST00000536617 (HIP1R-002) 122859422-122862383 retained_intron
ENST00000536772 (HIP1R-007) 122850806-122855359 retained_intron
ENST00000536847 (HIP1R-008) 122853483-122856101 retained_intron
ENST00000537322 (HIP1R-011) 122861716-122862486 processed_transcript
ENST00000538236 (HIP1R-009) 122860038-122861647 retained_intron
ENST00000541712 (HIP1R-006) 122858825-122860329 retained_intron
ENSG00000139722 (VPS37B)
vacuolar protein sorting 37 homolog B (S. cerevisiae)
ENST00000267202 (VPS37B-001) 122865328-122896444 protein_coding
ENST00000371248 (VPS37B-004) 122867415-122890159 protein_coding
ENST00000535765 (VPS37B-003) 122867154-122896127 protein_coding
ENST00000543590 (VPS37B-002) 122870075-122871681 retained_intron
ENSG00000256152 (RP11-463O12.3)
ENST00000537827 (RP11-463O12.3-001) 122865335-122867021 lincRNA
ENSG00000280138 (RP11-463O12.5)
ENST00000623210 (RP11-463O12.5-001) 122870059-122888720 TEC
CIL_0002PB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000915-ENSMUSG00000066278 CGP 10090 5:123973628-124032260
GeneTranscriptPositionBiotype
ENSMUSG00000000915 (Hip1r)
huntingtin interacting protein 1 related
ENSMUST00000000939 (Hip1r-001) 123973628-124003211 protein_coding
ENSMUST00000166258 (Hip1r-003) 123994805-123997399 nonsense_mediated_decay
ENSMUST00000166684 (Hip1r-006) 124000599-124001674 retained_intron
ENSMUST00000167325 (Hip1r-005) 124000383-124001688 retained_intron
ENSMUST00000167879 (Hip1r-002) 123980254-123989984 protein_coding
ENSMUST00000171407 (Hip1r-004) 123999410-124001007 retained_intron
ENSMUSG00000066278 (Vps37b)
vacuolar protein sorting 37B (yeast)
ENSMUST00000040967 (Vps37b-201) 124004641-124032260 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002PB_0001ENSG00000130787ENST00000253083ENST00000452196ENST00000535012ENST00000535831ENST00000536617ENST00000536772ENST00000536847ENST00000537322ENST00000538236ENST00000541712ENSG00000139722ENST00000267202ENST00000371248ENST00000535765ENST00000543590ENSG00000256152ENST00000537827ENSG00000280138ENST00000623210CIL_0002PB_0002ENSMUSG00000000915ENSMUST00000000939ENSMUST00000166258ENSMUST00000166684ENSMUST00000167325ENSMUST00000167879ENSMUST00000171407ENSMUSG00000066278ENSMUST00000040967
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002PB_0001ENSG00000130787ENST00000253083ENST00000452196ENST00000535012ENST00000535831ENST00000536617ENSG00000139722ENST00000267202ENST00000371248ENST00000535765ENSG00000256152ENST00000537827ENSG00000280138ENST00000623210CIL_0002PB_0002ENSMUSG00000000915ENSMUST00000000939ENSMUSG00000066278ENSMUST00000040967
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130787 ENST00000253083 13.914±0.00 15.417±0.00 2.919±0.00 14.029±11.25 5.068±2.52 3.645±1.58 2.437±2.12 13.966±13.31 4.401±3.61 3.414±1.79 0.978±0.00 10.562±6.92 7.225±1.94 6.043±1.54
ENST00000452196 N/A N/A N/A N/A N/A N/A N/A 1.200±0.00 N/A N/A 0.558±0.00 N/A N/A N/A
ENST00000535012 N/A N/A N/A N/A N/A N/A N/A 1.200±0.00 N/A N/A N/A N/A N/A N/A
ENST00000535831 N/A N/A N/A 5.696±0.00 N/A N/A 0.283±0.00 N/A N/A N/A N/A N/A N/A 1.830±0.00
ENST00000536617 N/A N/A N/A 1.973±0.00 2.619±0.00 N/A 0.287±0.00 1.477±0.00 N/A N/A N/A 7.118±5.24 N/A N/A
ENST00000536772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000139722 ENST00000267202 6.338±0.00 9.631±0.00 1.129±0.00 3.479±2.27 6.939±0.00 4.168±1.44 2.663±2.25 5.389±5.04 N/A 11.569±0.00 0.375±0.05 13.257±9.10 10.962±2.04 8.953±0.11
ENST00000371248 N/A N/A 2.024±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.926±0.00 N/A N/A N/A
ENST00000543590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000256152 ENST00000537827 12.481±0.00 16.328±0.00 N/A 17.728±0.00 14.054±0.00 9.236±0.00 9.160±0.00 19.211±0.00 2.111±0.00 15.481±0.00 N/A 21.513±8.44 11.726±1.70 15.446±0.76
ENSG00000280138 ENST00000623210 N/A N/A 1.053±0.00 0.088±0.00 1.418±1.17 0.803±0.63 N/A 0.219±0.00 0.224±0.00 0.732±0.45 N/A 0.647±0.39 0.162±0.00 0.331±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000915 ENSMUST00000000939 4.697±0.40 4.067±0.91 28.272±1.47 14.866±8.31 12.541±6.30 15.444±0.96 3.384±0.42 10.764±0.39 7.612±2.32 16.552±0.62 2.728±0.68 12.724±2.24 17.451±4.51 6.998±0.86
ENSMUST00000166258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000066278 ENSMUST00000040967 5.913±2.06 72.906±5.23 20.682±2.76 27.258±12.90 16.454±1.08 27.356±8.74 4.279±0.85 10.012±2.37 12.343±2.87 13.958±4.04 2.169±0.54 22.594±8.04 11.584±2.48 21.222±7.30

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