C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00006P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000039319-ENSDARG00000056200 CGP 7955 5:29644435-29674107
GeneTranscriptPositionBiotype
ENSDARG00000039319 (vps37b)
vacuolar protein sorting 37 homolog B (S. cerevisiae) 		ENSDART00000078642 (vps37b-001) 29644435-29661354 protein_coding
ENSDARG00000056200 (abcb9)
ATP-binding cassette, sub-family B (MDR/TAP), member 9 		ENSDART00000078649 (abcb9-001) 29662795-29674107 protein_coding
CIL_00006P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139722-ENSG00000150967 CGP 9606 12:122865328-122981649
GeneTranscriptPositionBiotype
ENSG00000139722 (VPS37B)
vacuolar protein sorting 37 homolog B (S. cerevisiae) 		ENST00000267202 (VPS37B-001) 122865328-122896444 protein_coding
ENST00000371248 (VPS37B-004) 122867415-122890159 protein_coding
ENST00000535765 (VPS37B-003) 122867154-122896127 protein_coding
ENST00000543590 (VPS37B-002) 122870075-122871681 retained_intron
ENSG00000182196 (ARL6IP4)
ADP-ribosylation factor-like 6 interacting protein 4 		ENST00000315580 (ARL6IP4-001) 122980060-122982909 protein_coding
ENST00000357866 (ARL6IP4-011) 122981140-122982676 protein_coding
ENST00000392433 (ARL6IP4-010) 122980928-122982909 retained_intron
ENST00000392435 (ARL6IP4-018) 122980191-122982711 protein_coding
ENST00000412505 (ARL6IP4-021) 122980703-122982860 protein_coding
ENST00000413381 (ARL6IP4-013) 122980231-122982538 protein_coding
ENST00000426960 (ARL6IP4-014) 122980263-122982795 protein_coding
ENST00000439686 (ARL6IP4-019) 122980748-122982706 protein_coding
ENST00000442210 (ARL6IP4-016) 122980696-122982765 retained_intron
ENST00000453766 (ARL6IP4-003) 122980189-122982909 protein_coding
ENST00000454885 (ARL6IP4-004) 122980495-122982909 protein_coding
ENST00000456762 (ARL6IP4-015) 122981137-122982731 protein_coding
ENST00000536073 (ARL6IP4-022) 122981953-122982908 retained_intron
ENST00000536502 (ARL6IP4-007) 122980721-122982873 retained_intron
ENST00000539576 (ARL6IP4-012) 122980682-122982906 retained_intron
ENST00000539770 (ARL6IP4-005) 122980179-122982908 nonsense_mediated_decay
ENST00000540382 (ARL6IP4-009) 122980733-122982883 retained_intron
ENST00000540708 (ARL6IP4-006) 122980716-122982890 retained_intron
ENST00000542099 (ARL6IP4-017) 122980191-122982073 protein_coding
ENST00000543566 (ARL6IP4-002) 122980060-122982913 protein_coding
ENSG00000256152 (RP11-463O12.3)
 ENST00000537827 (RP11-463O12.3-001) 122865335-122867021 lincRNA
ENSG00000280138 (RP11-463O12.5)
 ENST00000623210 (RP11-463O12.5-001) 122870059-122888720 TEC
CIL_00006P_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000066278-ENSMUSG00000029408 CGP 10090 5:124004641-124095798
GeneTranscriptPositionBiotype
ENSMUSG00000029408 (Abcb9)
ATP-binding cassette, sub-family B (MDR/TAP), member 9 		ENSMUST00000031354 (Abcb9-001) 124061530-124095798 protein_coding
ENSMUST00000126856 (Abcb9-004) 124071711-124090262 nonsense_mediated_decay
ENSMUST00000126970 (Abcb9-002) 124087943-124095786 retained_intron
ENSMUST00000141510 (Abcb9-003) 124071711-124090262 nonsense_mediated_decay
ENSMUST00000148392 (Abcb9-006) 124076119-124079820 processed_transcript
ENSMUST00000153433 (Abcb9-005) 124073325-124079090 retained_intron
ENSMUSG00000066278 (Vps37b)
vacuolar protein sorting 37B (yeast) 		ENSMUST00000040967 (Vps37b-201) 124004641-124032260 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00006P_0001ENSDARG00000039319ENSDART00000078642ENSDARG00000056200ENSDART00000078649CIL_00006P_0002ENSG00000139722ENST00000267202ENST00000371248ENST00000535765ENST00000543590ENSG00000182196ENST00000315580ENST00000357866ENST00000392433ENST00000392435ENST00000412505ENST00000413381ENST00000426960ENST00000439686ENST00000442210ENST00000453766ENST00000454885ENST00000456762ENST00000536073ENST00000536502ENST00000539576ENST00000539770ENST00000540382ENST00000540708ENST00000542099ENST00000543566ENSG00000256152ENST00000537827ENSG00000280138ENST00000623210CIL_00006P_0003ENSMUSG00000029408ENSMUST00000031354ENSMUST00000126856ENSMUST00000126970ENSMUST00000141510ENSMUST00000148392ENSMUST00000153433ENSMUSG00000066278ENSMUST00000040967
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00006P_0001ENSDARG00000039319ENSDART00000078642ENSDARG00000056200ENSDART00000078649CIL_00006P_0002ENSG00000139722ENST00000267202ENST00000371248ENST00000535765ENSG00000182196ENST00000315580ENST00000412505ENST00000413381ENST00000426960ENST00000439686ENST00000453766ENST00000454885ENST00000456762ENST00000536073ENST00000536502ENST00000543566ENSG00000256152ENST00000537827ENSG00000280138ENST00000623210CIL_00006P_0003ENSMUSG00000029408ENSMUST00000031354ENSMUST00000126970ENSMUST00000141510ENSMUSG00000066278ENSMUST00000040967
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039319 ENSDART00000078642 N/A N/A N/A N/A N/A N/A 10.470±0.00 0.303±0.00 1.221±0.00 N/A N/A N/A N/A N/A
ENSDARG00000056200 ENSDART00000078649 N/A N/A N/A 6.944±3.78 N/A N/A 4.142±1.67 32.200±8.47 0.103±0.00 N/A 5.288±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139722 ENST00000267202 6.338±0.00 9.631±0.00 1.129±0.00 3.479±2.27 6.939±0.00 4.168±1.44 2.663±2.25 5.389±5.04 N/A 11.569±0.00 0.375±0.05 13.257±9.10 10.962±2.04 8.953±0.11
ENST00000371248 N/A N/A 2.024±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.926±0.00 N/A N/A N/A
ENST00000543590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182196 ENST00000315580 N/A N/A 2.335±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000357866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.250±0.00 45.994±0.00 44.940±5.94 N/A
ENST00000413381 N/A N/A N/A N/A 6.239±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 67.335±13.73 38.829±6.27 N/A
ENST00000439686 171.480±0.00 222.041±0.00 N/A 91.399±0.00 167.698±0.00 84.647±78.63 51.628±0.00 100.145±0.00 77.670±0.00 99.654±97.17 34.503±0.00 72.519±41.18 73.914±11.25 189.662±93.57
ENST00000442210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453766 N/A N/A N/A 8.846±0.00 N/A N/A N/A 8.449±0.00 N/A N/A 6.660±0.00 116.361±0.00 N/A N/A
ENST00000454885 N/A N/A N/A N/A 46.115±0.00 45.161±0.00 9.104±6.39 N/A N/A N/A 9.632±0.00 N/A N/A N/A
ENST00000456762 N/A N/A 13.985±0.00 36.113±10.08 11.884±0.00 8.243±0.00 5.749±0.00 32.610±0.00 21.198±0.00 7.189±0.00 17.586±0.00 10.203±0.00 N/A N/A
ENST00000536073 89.200±0.00 148.920±0.00 N/A N/A 76.525±0.00 N/A N/A 68.277±0.00 N/A N/A 18.685±0.00 87.966±0.00 65.448±14.28 N/A
ENST00000536502 N/A N/A N/A 57.558±0.00 N/A 45.107±0.00 14.835±0.00 41.063±0.00 30.096±0.00 N/A N/A N/A N/A N/A
ENST00000539576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543566 N/A N/A N/A N/A N/A 3.532±0.00 N/A N/A N/A 2.337±0.00 N/A N/A N/A N/A
ENSG00000256152 ENST00000537827 12.481±0.00 16.328±0.00 N/A 17.728±0.00 14.054±0.00 9.236±0.00 9.160±0.00 19.211±0.00 2.111±0.00 15.481±0.00 N/A 21.513±8.44 11.726±1.70 15.446±0.76
ENSG00000280138 ENST00000623210 N/A N/A 1.053±0.00 0.088±0.00 1.418±1.17 0.803±0.63 N/A 0.219±0.00 0.224±0.00 0.732±0.45 N/A 0.647±0.39 0.162±0.00 0.331±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029408 ENSMUST00000031354 2.339±0.62 4.209±1.06 0.513±0.05 3.380±2.34 2.918±1.15 1.902±0.28 1.426±0.41 1.568±0.19 0.509±0.16 1.605±0.23 1.875±0.58 0.852±0.46 1.935±2.00 4.337±2.61
ENSMUST00000126856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126970 1.408±0.62 N/A 0.306±0.04 N/A 1.723±0.49 N/A N/A 0.750±0.15 1.023±0.64 0.653±0.00 N/A 0.287±0.19 0.331±0.07 N/A
ENSMUST00000141510 N/A N/A N/A 3.711±0.00 0.530±0.00 N/A N/A N/A N/A N/A 0.600±0.00 N/A 0.339±0.00 1.990±0.00
ENSMUST00000148392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000066278 ENSMUST00000040967 5.913±2.06 72.906±5.23 20.682±2.76 27.258±12.90 16.454±1.08 27.356±8.74 4.279±0.85 10.012±2.37 12.343±2.87 13.958±4.04 2.169±0.54 22.594±8.04 11.584±2.48 21.222±7.30

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