C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 37 homolog B (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000267202 VPS37B-001 ENSG00000139722 9606 - 12:122865328-122896444 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000267202
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000267202 6.338±0.00 9.631±0.00 1.129±0.00 3.479±2.27 6.939±0.00 4.168±1.44 2.663±2.25 5.389±5.04 11.569±0.00 0.375±0.05 13.257±9.10 10.962±2.04 8.953±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0001 VISTA 12:122762377-123367178
CIL_0002PB CIL_0002PB_0001 CGP 12:122834453-122896444
CIL_00006P CIL_00006P_0002 CGP 12:122865328-122981649

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000813 IDA ESCRT I complex
GO:0005515 IPI protein binding
GO:0010008 TAS endosome membrane
GO:0015031 IEA protein transport
GO:0016032 TAS viral process
GO:0016197 TAS endosomal transport
GO:0019058 TAS viral life cycle
GO:0019068 TAS virion assembly
GO:0019082 TAS viral protein processing
GO:0030496 IDA midbody
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome
GO:0075733 TAS intracellular transport of virus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040967 Vps37b-201 protein_coding Mus_musculus 0 874

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