C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ras homolog family member F (in filopodia)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139725 RHOF 9606 - 12:121777754-121803403 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000267205 RHOF-001 121777754-121794262 protein_coding
  ENST00000535560 RHOF-003 121781080-121794355 protein_coding
  ENST00000537171 RHOF-002 121780487-121794262 protein_coding
  ENST00000537265 RHOF-004 121779418-121793360 protein_coding
  ENST00000541657 RHOF-006 121780952-121802928 protein_coding
  ENST00000545544 RHOF-005 121793151-121803403 processed_transcript
  ENST00000546227 RHOF-007 121779608-121800677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyOvaryTestisENST00000267205ENST00000537171ENST00000546227
Transcript ID Colon Kidney Ovary Testis
ENST00000267205 N/A N/A 0.850±0.00 4.571±0.00
ENST00000537171 2.335±0.00 N/A N/A N/A
ENST00000546227 N/A 0.896±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074R CIL_00074R_0002 CGP 12:121651118-121783001
CIL_0000F9 CIL_0000F9_0002 CGP 12:121712752-121803403
CIL_00006S CIL_00006S_0002 CGP 12:121777754-121832584

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 NAS:IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0005856 NAS cytoskeleton
GO:0005886 TAS plasma membrane
GO:0006184 NAS:IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007015 IDA actin filament organization
GO:0007165 IEA signal transduction
GO:0007264 IEA:TAS small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0051056 TAS regulation of small GTPase mediated signal transduction
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054389 rhof ras homolog gene family, member F protein_coding Danio_rerio
ENSMUSG00000029449 Rhof ras homolog gene family, member f protein_coding Mus_musculus

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