C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ras homolog gene family, member f
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029449 Rhof 10090 - 5:123103044-123132692 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031401 Rhof-001 123118178-123132692 protein_coding
  ENSMUST00000160479 Rhof-003 123103044-123132461 nonsense_mediated_decay
  ENSMUST00000162208 Rhof-002 123111167-123132429 processed_transcript
  ENSMUST00000186469 Rhof-201 123103044-123132396 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031401ENSMUST00000160479ENSMUST00000162208ENSMUST00000186469
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031401 N/A N/A 0.502±0.00 9.278±0.00 11.866±3.13 19.947±1.57 N/A 4.391±0.31 0.534±0.41 3.842±0.24 0.900±0.00 1.743±0.49 1.491±0.93 0.350±0.09
ENSMUST00000160479 N/A 1.331±0.00 N/A N/A N/A N/A 0.295±0.00 N/A N/A N/A N/A N/A N/A 0.111±0.00
ENSMUST00000162208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.292±0.00
ENSMUST00000186469 2.488±0.00 1.613±0.00 0.389±0.08 N/A 3.510±0.70 N/A 0.522±0.16 0.755±0.13 0.728±0.59 0.878±0.06 0.490±0.11 0.600±0.12 0.481±0.27 0.031±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074R CIL_00074R_0003 CGP 5:123035769-123117749
CIL_0000F9 CIL_0000F9_0003 CGP 5:123068415-123132692
CIL_00006S CIL_00006S_0003 CGP 5:123103044-123167435

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0007015 IEA actin filament organization
GO:0007264 IEA small GTPase mediated signal transduction
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054389 rhof ras homolog gene family, member F protein_coding Danio_rerio
ENSG00000139725 RHOF ras homolog family member F (in filopodia) protein_coding Homo_sapiens

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