C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Zic family member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139800 ZIC5 9606 - 13:99962964-99971909 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000267294 ZIC5-001 99962964-99971909 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastMuscleOvaryPlacentaTestisENST00000267294
Transcript ID Adrenal Brain Breast Muscle Ovary Placenta Testis
ENST00000267294 0.022±0.00 0.478±0.05 0.018±0.00 0.005±0.00 0.285±0.24 0.019±0.00 1.440±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093F CIL_00093F_0001 VISTA 13:99386191-99989823
CIL_0004FV CIL_0004FV_0002 CGP 13:99606669-99971909
CIL_0007LI CIL_0007LI_0001 UCNEbase 13:99687864-100523501
CIL_0004FW CIL_0004FW_0002 CGP 13:99962964-99986773

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001843 IEA neural tube closure
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0030154 IEA cell differentiation
GO:0030900 IEA forebrain development
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016022 zic5 zic family member 5 (odd-paired homolog, Drosophila) protein_coding Danio_rerio
ENSMUSG00000041703 Zic5 zinc finger protein of the cerebellum 5 protein_coding Mus_musculus

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