C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004FW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000016022-ENSDARG00000016022 CGP 7955 9:32307416-32347632
GeneTranscriptPositionBiotype
ENSDARG00000015554 (zic2a)
zic family member 2 (odd-paired homolog, Drosophila), a 		ENSDART00000010774 (zic2a-001) 32315469-32320318 protein_coding
ENSDARG00000016022 (zic5)
zic family member 5 (odd-paired homolog, Drosophila) 		ENSDART00000022204 (zic5-001) 32307416-32311356 protein_coding
ENSDART00000137343 (zic5-002) 32307416-32347632 processed_transcript
CIL_0004FW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139800-ENSG00000043355 CGP 9606 13:99962964-99986773
GeneTranscriptPositionBiotype
ENSG00000043355 (ZIC2)
Zic family member 2 		ENST00000376335 (ZIC2-001) 99981772-99986773 protein_coding
ENST00000468291 (ZIC2-004) 99984689-99985492 processed_transcript
ENST00000477213 (ZIC2-005) 99984789-99985474 processed_transcript
ENST00000481565 (ZIC2-003) 99985494-99985904 processed_transcript
ENST00000490085 (ZIC2-002) 99984289-99985492 processed_transcript
ENST00000620342 (ZIC2-201) 99982065-99985682 protein_coding
ENSG00000139800 (ZIC5)
Zic family member 5 		ENST00000267294 (ZIC5-001) 99962964-99971909 protein_coding
CIL_0004FW_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041703-ENSMUSG00000061524 CGP 10090 14:122456795-122479852
GeneTranscriptPositionBiotype
ENSMUSG00000041703 (Zic5)
zinc finger protein of the cerebellum 5 		ENSMUST00000039118 (Zic5-001) 122456795-122465677 protein_coding
ENSMUST00000143084 (Zic5-002) 122459193-122460021 processed_transcript
ENSMUSG00000061524 (Zic2)
zinc finger protein of the cerebellum 2 		ENSMUST00000075888 (Zic2-001) 122475435-122479852 protein_coding
ENSMUST00000137059 (Zic2-002) 122478100-122479050 retained_intron
ENSMUSG00000085555 (2610035F20Rik)
RIKEN cDNA 2610035F20 gene 		ENSMUST00000135485 (2610035F20Rik-002) 122470284-122473579 retained_intron
ENSMUST00000177306 (2610035F20Rik-001) 122470377-122475199 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004FW_0001ENSDARG00000015554ENSDART00000010774ENSDARG00000016022ENSDART00000022204ENSDART00000137343CIL_0004FW_0002ENSG00000043355ENST00000376335ENST00000468291ENST00000477213ENST00000481565ENST00000490085ENST00000620342ENSG00000139800ENST00000267294CIL_0004FW_0003ENSMUSG00000041703ENSMUST00000039118ENSMUST00000143084ENSMUSG00000061524ENSMUST00000075888ENSMUST00000137059ENSMUSG00000085555ENSMUST00000135485ENSMUST00000177306
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004FW_0001ENSDARG00000015554ENSDART00000010774ENSDARG00000016022ENSDART00000022204ENSDART00000137343CIL_0004FW_0002ENSG00000043355ENST00000376335ENST00000468291ENST00000620342ENSG00000139800ENST00000267294CIL_0004FW_0003ENSMUSG00000041703ENSMUST00000039118ENSMUST00000143084ENSMUSG00000061524ENSMUST00000075888ENSMUST00000137059ENSMUSG00000085555ENSMUST00000135485ENSMUST00000177306
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015554 ENSDART00000010774 N/A N/A N/A 121.264±9.54 N/A N/A 0.029±0.01 0.037±0.01 0.051±0.00 N/A 4.218±0.00 N/A N/A N/A
ENSDARG00000016022 ENSDART00000022204 N/A N/A N/A 57.061±13.20 N/A N/A N/A 0.903±0.06 0.061±0.00 N/A 1.808±0.00 N/A N/A N/A
ENSDART00000137343 N/A N/A N/A 103.501±0.00 N/A N/A 0.041±0.00 0.481±0.00 0.035±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000043355 ENST00000376335 0.007±0.00 0.104±0.00 N/A 1.712±1.25 N/A N/A N/A 0.015±0.00 N/A N/A N/A 0.326±0.18 0.100±0.05 0.743±0.00
ENST00000468291 N/A N/A N/A N/A 0.313±0.00 N/A N/A 0.288±0.00 N/A N/A N/A N/A N/A N/A
ENST00000477213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620342 N/A 0.208±0.00 N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A 0.035±0.00 N/A 0.405±0.00
ENSG00000139800 ENST00000267294 N/A 0.022±0.00 N/A 0.478±0.05 0.018±0.00 N/A N/A N/A N/A N/A 0.005±0.00 0.285±0.24 0.019±0.00 1.440±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041703 ENSMUST00000039118 0.241±0.01 0.017±0.01 0.002±0.00 1.860±1.23 N/A N/A N/A 0.006±0.00 0.004±0.00 0.010±0.00 N/A 0.031±0.02 0.049±0.03 2.052±0.98
ENSMUST00000143084 0.683±0.03 N/A N/A N/A N/A N/A N/A N/A 0.012±0.00 0.049±0.00 N/A 0.133±0.06 0.124±0.02 6.492±2.92
ENSMUSG00000061524 ENSMUST00000075888 0.024±0.01 0.039±0.02 0.005±0.00 16.170±10.05 0.027±0.01 N/A N/A 0.013±0.00 0.017±0.02 N/A N/A 0.051±0.03 0.046±0.01 0.017±0.01
ENSMUST00000137059 0.074±0.00 0.193±0.12 0.026±0.00 N/A N/A N/A 0.144±0.05 N/A 0.010±0.00 0.081±0.00 N/A N/A N/A N/A
ENSMUSG00000085555 ENSMUST00000135485 N/A N/A N/A 0.614±0.37 N/A N/A N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A
ENSMUST00000177306 N/A N/A N/A 1.034±0.52 N/A 0.056±0.00 N/A N/A N/A N/A N/A 0.039±0.00 0.023±0.02 0.031±0.00

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