C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB20, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139832 RAB20 9606 - 13:110523066-110561733 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000267328 RAB20-001 110523066-110561733 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000267328
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000267328 18.119±0.00 12.187±0.00 1.014±0.00 1.490±1.25 6.636±3.53 5.195±3.35 2.461±1.98 9.192±5.83 9.710±8.67 10.729±6.79 1.278±1.15 14.293±6.53 13.686±2.06 7.919±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058M CIL_00058M_0002 CGP 13:110305812-110561733
CIL_00058H CIL_00058H_0002 CGP 13:110523066-110639993

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005794 IDA Golgi apparatus
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0045335 IDA phagocytic vesicle
GO:0090383 IMP phagosome acidification
GO:0090385 IMP phagosome-lysosome fusion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005049 rab20 RAB20, member RAS oncogene family protein_coding Danio_rerio
ENSMUSG00000031504 Rab20 RAB20, member RAS oncogene family protein_coding Mus_musculus

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