C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB20, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031504 Rab20 10090 - 8:11453392-11478638 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033900 Rab20-201 11453392-11478638 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033900
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033900 2.740±1.98 7.519±1.31 6.339±1.75 0.147±0.06 5.822±0.48 14.665±0.66 12.329±3.71 7.217±2.02 3.682±2.96 4.724±3.45 1.174±0.17 9.371±5.82 6.553±2.71 5.570±2.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058M CIL_00058M_0003 CGP 8:11312805-11478638
CIL_00058H CIL_00058H_0003 CGP 8:11453392-11514960

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005794 IEA Golgi apparatus
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045335 ISS phagocytic vesicle
GO:0090383 ISS phagosome acidification
GO:0090385 ISS phagosome-lysosome fusion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005049 rab20 RAB20, member RAS oncogene family protein_coding Danio_rerio
ENSG00000139832 RAB20 RAB20, member RAS oncogene family protein_coding Homo_sapiens

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