C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 27 (fatty acid transporter), member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140284 SLC27A2 9606 + 15:50182196-50236395 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000267842 SLC27A2-001 50182196-50236395 protein_coding
  ENST00000380902 SLC27A2-002 50182233-50236378 protein_coding
  ENST00000544960 SLC27A2-003 50191001-50236384 protein_coding
  ENST00000559938 SLC27A2-004 50205353-50226134 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000267842ENST00000380902ENST00000559938
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000267842 2.175±0.00 10.868±0.00 1.026±0.00 1.767±0.00 2.505±1.20 23.481±6.59 103.030±0.00 2.099±0.00 0.236±0.00 1.537±0.80 16.693±10.68 1.743±0.00
ENST00000380902 N/A N/A N/A N/A N/A 4.299±0.00 N/A 1.766±0.00 N/A N/A N/A 1.681±0.00
ENST00000559938 N/A 61.488±0.00 N/A N/A 19.988±0.00 73.168±0.00 N/A N/A N/A 5.605±0.00 83.437±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E4 CIL_0002E4_0001 CGP 15:49858238-50236395
CIL_0002E7 CIL_0002E7_0001 CGP 15:50182196-50266026

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000038 IEA very long-chain fatty acid metabolic process
GO:0001561 IDA fatty acid alpha-oxidation
GO:0001676 IDA long-chain fatty acid metabolic process
GO:0003824 IEA catalytic activity
GO:0004467 IDA long-chain fatty acid-CoA ligase activity
GO:0005102 IPI receptor binding
GO:0005524 IEA ATP binding
GO:0005739 IEA mitochondrion
GO:0005777 IEA peroxisome
GO:0005778 IDA peroxisomal membrane
GO:0005779 IDA integral component of peroxisomal membrane
GO:0005783 IEA endoplasmic reticulum
GO:0005788 IDA endoplasmic reticulum lumen
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006635 IDA fatty acid beta-oxidation
GO:0006699 IDA bile acid biosynthetic process
GO:0008152 IEA metabolic process
GO:0008206 TAS bile acid metabolic process
GO:0015245 IEA fatty acid transporter activity
GO:0015908 IEA fatty acid transport
GO:0019899 IPI enzyme binding
GO:0030176 IDA integral component of endoplasmic reticulum membrane
GO:0031957 IDA very long-chain fatty acid-CoA ligase activity
GO:0042760 IEA very long-chain fatty acid catabolic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0044539 IDA long-chain fatty acid import
GO:0050197 IDA phytanate-CoA ligase activity
GO:0070062 IDA extracellular vesicular exosome
GO:0070251 IDA pristanate-CoA ligase activity
GO:0097089 IDA methyl-branched fatty acid metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013177 slc27a2b solute carrier family 27 (fatty acid transporter), member 2b protein_coding Danio_rerio
ENSDARG00000036237 slc27a2a solute carrier family 27 (fatty acid transporter), member 2a protein_coding Danio_rerio
ENSDARG00000067520 SLC27A2 (3 of 4) solute carrier family 27 (fatty acid transporter), member 2 protein_coding Danio_rerio
ENSDARG00000088119 SLC27A2 (4 of 4) solute carrier family 27 (fatty acid transporter), member 2 protein_coding Danio_rerio
ENSMUSG00000027359 Slc27a2 solute carrier family 27 (fatty acid transporter), member 2 protein_coding Mus_musculus

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