C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 27 (fatty acid transporter), member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027359 Slc27a2 10090 + 2:126552407-126588243 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000061491 Slc27a2-001 126552407-126588243 protein_coding
  ENSMUST00000126249 Slc27a2-002 126553590-126564685 processed_transcript
  ENSMUST00000141482 Slc27a2-003 126556128-126587938 protein_coding
  ENSMUST00000150947 Slc27a2-004 126564760-126575491 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000061491ENSMUST00000141482ENSMUST00000150947
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000061491 0.368±0.08 N/A 1.873±0.15 1.881±0.82 0.749±0.32 0.232±0.09 384.973±211.66 122.210±140.60 0.534±0.24 N/A 0.672±0.34 14.410±15.21 0.453±0.26
ENSMUST00000141482 0.483±0.02 0.013±0.00 4.607±0.00 4.432±0.00 N/A 0.255±0.09 311.991±52.22 40.001±32.75 N/A 0.064±0.01 1.060±0.48 3.815±4.59 0.583±0.32
ENSMUST00000150947 N/A 0.008±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.308±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E4 CIL_0002E4_0002 CGP 2:126320973-126588243
CIL_0002E7 CIL_0002E7_0002 CGP 2:126552407-126619299

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000038 IDA very long-chain fatty acid metabolic process
GO:0001561 IEA fatty acid alpha-oxidation
GO:0001676 IDA long-chain fatty acid metabolic process
GO:0004467 IDA long-chain fatty acid-CoA ligase activity
GO:0005102 IEA receptor binding
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005777 IDA peroxisome
GO:0005778 IEA peroxisomal membrane
GO:0005779 ISS integral component of peroxisomal membrane
GO:0005783 IDA endoplasmic reticulum
GO:0005788 ISS endoplasmic reticulum lumen
GO:0005789 IEA endoplasmic reticulum membrane
GO:0006635 IEA fatty acid beta-oxidation
GO:0006699 IEA bile acid biosynthetic process
GO:0015245 IDA fatty acid transporter activity
GO:0015908 IDA fatty acid transport
GO:0019899 IEA enzyme binding
GO:0030176 IEA integral component of endoplasmic reticulum membrane
GO:0031957 IDA very long-chain fatty acid-CoA ligase activity
GO:0042760 IMP very long-chain fatty acid catabolic process
GO:0044539 IEA long-chain fatty acid import
GO:0050197 IEA phytanate-CoA ligase activity
GO:0070062 IEA extracellular vesicular exosome
GO:0070251 IEA pristanate-CoA ligase activity
GO:0097089 IEA methyl-branched fatty acid metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013177 slc27a2b solute carrier family 27 (fatty acid transporter), member 2b protein_coding Danio_rerio
ENSDARG00000036237 slc27a2a solute carrier family 27 (fatty acid transporter), member 2a protein_coding Danio_rerio
ENSDARG00000067520 SLC27A2 (3 of 4) solute carrier family 27 (fatty acid transporter), member 2 protein_coding Danio_rerio
ENSDARG00000088119 SLC27A2 (4 of 4) solute carrier family 27 (fatty acid transporter), member 2 protein_coding Danio_rerio
ENSG00000140284 SLC27A2 solute carrier family 27 (fatty acid transporter), member 2 protein_coding Homo_sapiens

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