C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002E7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140284-ENSG00000140287 CGP 9606 15:50182196-50266026
GeneTranscriptPositionBiotype
ENSG00000104043 (ATP8B4)
ATPase, class I, type 8B, member 4 		ENST00000284509 (ATP8B4-201) 49858239-50119222 protein_coding
ENST00000557955 (ATP8B4-003) 49859639-50119218 nonsense_mediated_decay
ENST00000558024 (ATP8B4-016) 50009272-50047387 protein_coding
ENST00000558203 (ATP8B4-014) 49860214-49879588 retained_intron
ENST00000558458 (ATP8B4-011) 49920274-49931234 nonsense_mediated_decay
ENST00000558498 (ATP8B4-006) 49858238-49876695 protein_coding
ENST00000558829 (ATP8B4-009) 50047392-50182817 protein_coding
ENST00000558906 (ATP8B4-002) 49859639-50119226 nonsense_mediated_decay
ENST00000558959 (ATP8B4-010) 49979606-50044674 processed_transcript
ENST00000559726 (ATP8B4-007) 49858239-50113316 nonsense_mediated_decay
ENST00000559829 (ATP8B4-001) 49859000-50114504 protein_coding
ENST00000559998 (ATP8B4-012) 49897435-49917276 retained_intron
ENST00000560161 (ATP8B4-017) 49883159-49898221 processed_transcript
ENST00000560354 (ATP8B4-015) 49860457-49876606 retained_intron
ENST00000560437 (ATP8B4-008) 49987512-50119457 processed_transcript
ENST00000560479 (ATP8B4-005) 49859002-49908093 protein_coding
ENST00000561104 (ATP8B4-013) 49898146-49917270 retained_intron
ENST00000561385 (ATP8B4-004) 49894892-49902283 retained_intron
ENSG00000140284 (SLC27A2)
solute carrier family 27 (fatty acid transporter), member 2 		ENST00000267842 (SLC27A2-001) 50182196-50236395 protein_coding
ENST00000380902 (SLC27A2-002) 50182233-50236378 protein_coding
ENST00000544960 (SLC27A2-003) 50191001-50236384 protein_coding
ENST00000559938 (SLC27A2-004) 50205353-50226134 retained_intron
ENSG00000140287 (HDC)
histidine decarboxylase 		ENST00000267845 (HDC-001) 50241947-50266026 protein_coding
ENST00000543581 (HDC-004) 50242013-50265666 protein_coding
ENST00000558679 (HDC-003) 50253726-50265965 retained_intron
ENST00000558761 (HDC-002) 50252920-50265726 retained_intron
ENST00000559190 (HDC-008) 50253124-50263315 retained_intron
ENST00000559683 (HDC-007) 50254552-50263429 protein_coding
ENST00000559816 (HDC-005) 50241947-50253305 retained_intron
ENSG00000241175 (RN7SL494P)
RNA, 7SL, cytoplasmic 494, pseudogene 		ENST00000461517 (RN7SL494P-201) 50244628-50244931 misc_RNA
CIL_0002E7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027359-ENSMUSG00000027360 CGP 10090 2:126552407-126619299
GeneTranscriptPositionBiotype
ENSMUSG00000027359 (Slc27a2)
solute carrier family 27 (fatty acid transporter), member 2 		ENSMUST00000061491 (Slc27a2-001) 126552407-126588243 protein_coding
ENSMUST00000126249 (Slc27a2-002) 126553590-126564685 processed_transcript
ENSMUST00000141482 (Slc27a2-003) 126556128-126587938 protein_coding
ENSMUST00000150947 (Slc27a2-004) 126564760-126575491 processed_transcript
ENSMUSG00000027360 (Hdc)
histidine decarboxylase 		ENSMUST00000028838 (Hdc-001) 126593667-126618678 protein_coding
ENSMUST00000124396 (Hdc-004) 126594584-126598261 processed_transcript
ENSMUST00000132382 (Hdc-003) 126604315-126607641 processed_transcript
ENSMUST00000138752 (Hdc-002) 126600234-126618661 retained_intron
ENSMUST00000148591 (Hdc-005) 126616173-126619299 processed_transcript
ENSMUSG00000097458 (Gm26697)
predicted gene, 26697 		ENSMUST00000180898 (Gm26697-201) 126521202-126553662 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002E7_0001ENSG00000104043ENST00000284509ENST00000557955ENST00000558203ENST00000558498ENST00000559726ENST00000559829ENST00000560479ENST00000561104ENSG00000140284ENST00000267842ENST00000380902ENST00000559938ENSG00000140287ENST00000267845ENST00000543581ENST00000558679ENST00000558761ENST00000559190ENST00000559683ENST00000559816ENSG00000241175ENST00000461517CIL_0002E7_0002ENSMUSG00000027359ENSMUST00000061491ENSMUST00000141482ENSMUST00000150947ENSMUSG00000027360ENSMUST00000028838ENSMUST00000124396ENSMUST00000138752ENSMUSG00000097458ENSMUST00000180898
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104043 ENST00000284509 0.771±0.00 N/A N/A N/A N/A 0.682±0.00 0.061±0.00 N/A N/A N/A N/A 0.340±0.00 N/A N/A
ENST00000557955 N/A N/A N/A N/A 0.582±0.00 1.111±0.00 N/A N/A 0.558±0.00 N/A N/A N/A N/A N/A
ENST00000558024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.266±0.00 N/A N/A N/A
ENST00000558458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558498 N/A 0.862±0.00 N/A N/A 1.055±0.00 2.134±0.00 0.324±0.06 N/A N/A N/A N/A 0.582±0.05 1.739±0.16 N/A
ENST00000558829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559726 N/A N/A N/A N/A 0.291±0.00 N/A N/A N/A 0.408±0.00 N/A N/A N/A N/A N/A
ENST00000559829 N/A N/A N/A 0.222±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.193±0.00 N/A N/A N/A
ENST00000561104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.135±0.00 N/A N/A N/A
ENST00000561385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000140284 ENST00000267842 2.175±0.00 N/A 10.868±0.00 1.026±0.00 1.767±0.00 2.505±1.20 N/A 23.481±6.59 103.030±0.00 2.099±0.00 0.236±0.00 1.537±0.80 16.693±10.68 1.743±0.00
ENST00000380902 N/A N/A N/A N/A N/A N/A N/A 4.299±0.00 N/A 1.766±0.00 N/A N/A N/A 1.681±0.00
ENST00000544960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559938 N/A N/A 61.488±0.00 N/A N/A 19.988±0.00 N/A 73.168±0.00 N/A N/A N/A 5.605±0.00 83.437±0.00 N/A
ENSG00000140287 ENST00000267845 N/A N/A N/A 0.049±0.00 0.259±0.00 N/A N/A N/A 0.116±0.00 N/A N/A N/A N/A N/A
ENST00000543581 N/A N/A N/A 0.045±0.00 N/A N/A 0.135±0.00 0.207±0.00 N/A 3.235±0.00 N/A 0.063±0.00 0.124±0.00 0.382±0.05
ENST00000558679 N/A N/A N/A 0.119±0.00 0.057±0.00 0.240±0.00 N/A 0.136±0.00 0.253±0.00 N/A N/A N/A N/A N/A
ENST00000558761 0.048±0.00 N/A N/A N/A 0.329±0.00 N/A N/A N/A N/A 0.706±0.00 N/A N/A 0.070±0.00 N/A
ENST00000559190 N/A 1.137±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.192±0.16 N/A 0.372±0.00
ENST00000559683 0.254±0.00 N/A N/A N/A N/A 1.324±0.00 N/A N/A 0.352±0.00 N/A N/A N/A 0.245±0.00 N/A
ENST00000559816 0.146±0.00 1.600±0.00 0.129±0.00 N/A 0.233±0.05 N/A 0.026±0.01 0.032±0.00 0.231±0.00 4.635±0.00 0.280±0.00 0.678±0.00 0.056±0.04 0.514±0.06
ENSG00000241175 ENST00000461517 0.128±0.00 0.402±0.00 N/A N/A N/A 0.851±0.00 N/A N/A N/A 0.269±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027359 ENSMUST00000061491 0.368±0.08 N/A N/A 1.873±0.15 1.881±0.82 0.749±0.32 0.232±0.09 384.973±211.66 122.210±140.60 0.534±0.24 N/A 0.672±0.34 14.410±15.21 0.453±0.26
ENSMUST00000126249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141482 0.483±0.02 N/A 0.013±0.00 4.607±0.00 4.432±0.00 N/A 0.255±0.09 311.991±52.22 40.001±32.75 N/A 0.064±0.01 1.060±0.48 3.815±4.59 0.583±0.32
ENSMUST00000150947 N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.308±0.00 N/A N/A
ENSMUSG00000027360 ENSMUST00000028838 18.225±17.12 5.025±1.11 0.089±0.05 0.564±0.08 1.139±0.32 0.307±0.09 0.561±0.21 4.259±1.01 2.354±2.03 34.448±0.60 0.105±0.03 62.451±20.14 0.547±0.48 6.433±2.47
ENSMUST00000124396 N/A N/A N/A 0.568±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138752 N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.00 N/A 0.016±0.00 2.673±0.00 N/A N/A
ENSMUST00000148591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097458 ENSMUST00000180898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.140±0.00

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