C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 27 (fatty acid transporter), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000267842 SLC27A2-001 ENSG00000140284 9606 + 15:50182196-50236395 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000267842
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000267842 2.175±0.00 10.868±0.00 1.026±0.00 1.767±0.00 2.505±1.20 23.481±6.59 103.030±0.00 2.099±0.00 0.236±0.00 1.537±0.80 16.693±10.68 1.743±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E4 CIL_0002E4_0001 CGP 15:49858238-50236395
CIL_0002E7 CIL_0002E7_0001 CGP 15:50182196-50266026

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000038 IEA very long-chain fatty acid metabolic process
GO:0001561 IDA fatty acid alpha-oxidation
GO:0001676 IDA long-chain fatty acid metabolic process
GO:0003824 IEA catalytic activity
GO:0004467 IDA long-chain fatty acid-CoA ligase activity
GO:0005102 IPI receptor binding
GO:0005524 IEA ATP binding
GO:0005739 IEA mitochondrion
GO:0005777 IEA peroxisome
GO:0005778 IDA peroxisomal membrane
GO:0005779 IDA integral component of peroxisomal membrane
GO:0005783 IEA endoplasmic reticulum
GO:0005788 IDA endoplasmic reticulum lumen
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006635 IDA fatty acid beta-oxidation
GO:0006699 IDA bile acid biosynthetic process
GO:0008152 IEA metabolic process
GO:0008206 TAS bile acid metabolic process
GO:0015245 IEA fatty acid transporter activity
GO:0015908 IEA fatty acid transport
GO:0019899 IPI enzyme binding
GO:0030176 IDA integral component of endoplasmic reticulum membrane
GO:0031957 IDA very long-chain fatty acid-CoA ligase activity
GO:0042760 IEA very long-chain fatty acid catabolic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0044539 IDA long-chain fatty acid import
GO:0050197 IDA phytanate-CoA ligase activity
GO:0070062 IDA extracellular vesicular exosome
GO:0070251 IDA pristanate-CoA ligase activity
GO:0097089 IDA methyl-branched fatty acid metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061491 Slc27a2-001 protein_coding Mus_musculus 0 1773
ENSMUST00000141482 Slc27a2-003 protein_coding Mus_musculus 0 1230
ENSMUST00000150947 Slc27a2-004 processed_transcript Mus_musculus 0 320

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