C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: electron-transfer-flavoprotein, alpha polypeptide
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140374 ETFA 9606 - 15:76215355-76311472 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000267950 ETFA-015 76216250-76311448 nonsense_mediated_decay
  ENST00000433983 ETFA-002 76216084-76311404 protein_coding
  ENST00000557943 ETFA-001 76215355-76311469 protein_coding
  ENST00000557975 ETFA-018 76216130-76228249 retained_intron
  ENST00000558803 ETFA-009 76274133-76283841 retained_intron
  ENST00000559075 ETFA-003 76230504-76311412 retained_intron
  ENST00000559386 ETFA-011 76274483-76311413 protein_coding
  ENST00000559602 ETFA-014 76216483-76311414 protein_coding
  ENST00000559758 ETFA-008 76274176-76292622 retained_intron
  ENST00000559973 ETFA-017 76216559-76292491 protein_coding
  ENST00000560044 ETFA-004 76231378-76311472 nonsense_mediated_decay
  ENST00000560179 ETFA-016 76216435-76226335 retained_intron
  ENST00000560309 ETFA-005 76286406-76311443 nonsense_mediated_decay
  ENST00000560345 ETFA-012 76274419-76292698 protein_coding
  ENST00000560595 ETFA-019 76216583-76311396 protein_coding
  ENST00000560726 ETFA-006 76216468-76311466 protein_coding
  ENST00000560816 ETFA-010 76245212-76286491 processed_transcript
  ENST00000560899 ETFA-007 76225905-76311414 nonsense_mediated_decay
  ENST00000561092 ETFA-013 76287768-76311402 retained_intron
  ENST00000565910 ETFA-020 76216321-76231398 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000267950ENST00000433983ENST00000557943ENST00000559075ENST00000559602ENST00000560044ENST00000560179ENST00000560595ENST00000560726
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000267950 14.514±0.00 1.997±0.00 6.883±1.00 6.056±3.28 9.990±3.03 21.809±13.49 16.360±5.87 23.526±21.00 5.057±1.91 16.118±0.53 18.183±0.00 13.543±2.53 13.956±0.00
ENST00000433983 N/A 5.722±0.00 8.251±0.00 2.383±0.00 4.497±0.00 N/A N/A 3.240±0.00 N/A N/A 8.235±1.72 13.054±5.53 N/A
ENST00000557943 N/A N/A N/A N/A 2.511±0.00 N/A 4.444±0.00 N/A 1.396±0.00 N/A 2.251±0.00 N/A 1.920±0.00
ENST00000559075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.728±0.00
ENST00000559602 25.890±0.00 N/A 14.140±0.00 N/A N/A N/A N/A N/A N/A N/A 13.253±0.00 13.964±0.00 11.618±6.46
ENST00000560044 N/A N/A N/A 5.439±0.00 N/A N/A N/A N/A N/A N/A N/A 18.272±0.00 N/A
ENST00000560179 N/A N/A N/A 6.934±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560595 N/A N/A 9.925±0.00 13.200±0.00 N/A 49.210±0.00 23.225±0.00 17.559±12.38 6.695±0.00 23.127±0.00 20.053±7.58 20.901±3.95 10.440±1.42
ENST00000560726 N/A N/A N/A N/A 10.392±0.00 N/A N/A N/A 2.911±0.00 16.718±0.00 7.913±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024A CIL_00024A_0001 CGP 15:75935969-76229121
CIL_000247 CIL_000247_0001 CGP 15:76059837-76311472
CIL_000248 CIL_000248_0001 CGP 15:76215355-76342476

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0009055 IDA:IEA electron carrier activity
GO:0016491 IDA oxidoreductase activity
GO:0022904 TAS respiratory electron transport chain
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0050660 IDA:IEA flavin adenine dinucleotide binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043944 etfa electron-transfer-flavoprotein, alpha polypeptide protein_coding Danio_rerio
ENSMUSG00000032314 Etfa electron transferring flavoprotein, alpha polypeptide protein_coding Mus_musculus

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