C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: electron-transfer-flavoprotein, alpha polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557943 ETFA-001 ENSG00000140374 9606 - 15:76215355-76311469 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLungOvaryTestisENST00000557943
Transcript ID Colon Kidney Lung Ovary Testis
ENST00000557943 2.511±0.00 4.444±0.00 1.396±0.00 2.251±0.00 1.920±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024A CIL_00024A_0001 CGP 15:75935969-76229121
CIL_000247 CIL_000247_0001 CGP 15:76059837-76311472
CIL_000248 CIL_000248_0001 CGP 15:76215355-76342476

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0009055 IDA:IEA electron carrier activity
GO:0016491 IDA oxidoreductase activity
GO:0022904 TAS respiratory electron transport chain
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0050660 IDA:IEA flavin adenine dinucleotide binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034866 Etfa-001 protein_coding Mus_musculus 0 1411
ENSMUST00000153186 Etfa-003 processed_transcript Mus_musculus 0 756
ENSMUST00000142587 Etfa-002 processed_transcript Mus_musculus 0 571
ENSMUST00000119271 Gm15285-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000139342 Etfa-004 processed_transcript Mus_musculus 0 514
ENSMUST00000117793 Gm15289-001 processed_pseudogene Mus_musculus 0 355

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