C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: electron-transfer-flavoprotein, alpha polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560595 ETFA-019 ENSG00000140374 9606 - 15:76216583-76311396 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000560595
Transcript ID Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000560595 9.925±0.00 13.200±0.00 49.210±0.00 23.225±0.00 17.559±12.38 6.695±0.00 23.127±0.00 20.053±7.58 20.901±3.95 10.440±1.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024A CIL_00024A_0001 CGP 15:75935969-76229121
CIL_000247 CIL_000247_0001 CGP 15:76059837-76311472
CIL_000248 CIL_000248_0001 CGP 15:76215355-76342476

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0009055 IEA electron carrier activity
GO:0050660 IEA flavin adenine dinucleotide binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034866 Etfa-001 protein_coding Mus_musculus 0 900
ENSMUST00000153186 Etfa-003 processed_transcript Mus_musculus 0 756
ENSMUST00000142587 Etfa-002 processed_transcript Mus_musculus 0 571
ENSMUST00000119271 Gm15285-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000117793 Gm15289-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000139342 Etfa-004 processed_transcript Mus_musculus 4e-31 139

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