C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140798 ABCC12 9606 - 16:48082973-48156018 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000311303 ABCC12-001 48082973-48146770 protein_coding
  ENST00000497206 ABCC12-002 48083696-48146430 nonsense_mediated_decay
  ENST00000526251 ABCC12-006 48087166-48091238 retained_intron
  ENST00000527640 ABCC12-010 48141311-48155993 protein_coding
  ENST00000528693 ABCC12-009 48121240-48155993 retained_intron
  ENST00000529084 ABCC12-007 48083347-48156018 nonsense_mediated_decay
  ENST00000529504 ABCC12-004 48083696-48146430 nonsense_mediated_decay
  ENST00000532355 ABCC12-012 48084055-48086640 processed_transcript
  ENST00000532494 ABCC12-005 48083696-48146430 nonsense_mediated_decay
  ENST00000533185 ABCC12-011 48111448-48115433 retained_intron
  ENST00000533639 ABCC12-008 48133769-48155993 nonsense_mediated_decay
  ENST00000534418 ABCC12-003 48083347-48146650 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLiverLungMuscleOvaryTestisENST00000311303ENST00000526251ENST00000528693ENST00000529084ENST00000529504ENST00000532355ENST00000532494ENST00000534418
Transcript ID Adipose Breast Heart Liver Lung Muscle Ovary Testis
ENST00000311303 N/A N/A N/A N/A N/A N/A 0.029±0.00 1.146±0.00
ENST00000526251 N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A
ENST00000528693 N/A N/A N/A N/A N/A N/A N/A 0.722±0.00
ENST00000529084 N/A N/A N/A N/A N/A N/A N/A 1.601±0.00
ENST00000529504 0.028±0.00 0.004±0.00 N/A 0.004±0.00 0.012±0.00 N/A 0.012±0.00 N/A
ENST00000532355 N/A N/A 0.066±0.00 N/A N/A N/A N/A N/A
ENST00000532494 N/A N/A N/A N/A N/A 0.048±0.00 0.008±0.00 N/A
ENST00000534418 N/A N/A N/A N/A N/A N/A N/A 1.677±1.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VQ CIL_0002VQ_0001 CGP 16:47461123-48156018

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IEA mitochondrion
GO:0006200 IEA ATP catabolic process
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013050 abcc12 ATP-binding cassette, sub-family C (CFTR/MRP), member 12 protein_coding Danio_rerio
ENSMUSG00000036872 Abcc12 ATP-binding cassette, sub-family C (CFTR/MRP), member 12 protein_coding Mus_musculus

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