C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002VQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102893-ENSG00000140798 CGP 9606 16:47461123-48156018
GeneTranscriptPositionBiotype
ENSG00000102893 (PHKB)
phosphorylase kinase, beta 		ENST00000299167 (PHKB-001) 47461326-47701523 protein_coding
ENST00000323584 (PHKB-002) 47461327-47700343 protein_coding
ENST00000563376 (PHKB-014) 47461350-47511731 protein_coding
ENST00000564711 (PHKB-009) 47696472-47699694 protein_coding
ENST00000564873 (PHKB-017) 47462667-47499831 protein_coding
ENST00000565424 (PHKB-013) 47461331-47548164 retained_intron
ENST00000566037 (PHKB-003) 47461123-47547547 protein_coding
ENST00000566044 (PHKB-004) 47461295-47699745 protein_coding
ENST00000566275 (PHKB-010) 47660703-47676409 protein_coding
ENST00000566319 (PHKB-007) 47664790-47700348 retained_intron
ENST00000566436 (PHKB-006) 47594150-47598036 processed_transcript
ENST00000566721 (PHKB-015) 47461329-47463522 processed_transcript
ENST00000567200 (PHKB-016) 47462112-47463969 protein_coding
ENST00000567402 (PHKB-005) 47461336-47590838 processed_transcript
ENST00000568171 (PHKB-008) 47650830-47664390 retained_intron
ENST00000568439 (PHKB-011) 47596428-47619429 protein_coding
ENST00000570047 (PHKB-012) 47499756-47587758 nonsense_mediated_decay
ENSG00000129636 (ITFG1)
integrin alpha FG-GAP repeat containing 1 		ENST00000320640 (ITFG1-001) 47154387-47461274 protein_coding
ENST00000537184 (ITFG1-011) 47155301-47311950 processed_transcript
ENST00000542691 (ITFG1-006) 47155557-47396220 processed_transcript
ENST00000544001 (ITFG1-002) 47155605-47461274 protein_coding
ENST00000563350 (ITFG1-005) 47425784-47459169 processed_transcript
ENST00000563730 (ITFG1-012) 47451396-47464149 protein_coding
ENST00000564825 (ITFG1-008) 47260660-47263014 processed_transcript
ENST00000565262 (ITFG1-010) 47155672-47258722 protein_coding
ENST00000565940 (ITFG1-003) 47448098-47459130 protein_coding
ENST00000567957 (ITFG1-009) 47155585-47238289 retained_intron
ENST00000568047 (ITFG1-004) 47154387-47312275 processed_transcript
ENST00000569551 (ITFG1-007) 47365571-47452757 retained_intron
ENSG00000140798 (ABCC12)
ATP-binding cassette, sub-family C (CFTR/MRP), member 12 		ENST00000311303 (ABCC12-001) 48082973-48146770 protein_coding
ENST00000497206 (ABCC12-002) 48083696-48146430 nonsense_mediated_decay
ENST00000526251 (ABCC12-006) 48087166-48091238 retained_intron
ENST00000527640 (ABCC12-010) 48141311-48155993 protein_coding
ENST00000528693 (ABCC12-009) 48121240-48155993 retained_intron
ENST00000529084 (ABCC12-007) 48083347-48156018 nonsense_mediated_decay
ENST00000529504 (ABCC12-004) 48083696-48146430 nonsense_mediated_decay
ENST00000532355 (ABCC12-012) 48084055-48086640 processed_transcript
ENST00000532494 (ABCC12-005) 48083696-48146430 nonsense_mediated_decay
ENST00000533185 (ABCC12-011) 48111448-48115433 retained_intron
ENST00000533639 (ABCC12-008) 48133769-48155993 nonsense_mediated_decay
ENST00000534418 (ABCC12-003) 48083347-48146650 nonsense_mediated_decay
ENSG00000222268 (RNA5SP425)
RNA, 5S ribosomal pseudogene 425 		ENST00000410336 (RNA5SP425-201) 47505432-47505543 rRNA
ENSG00000259918 (NDUFA5P11)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 pseudogene 11 		ENST00000567995 (NDUFA5P11-001) 47598654-47598996 processed_pseudogene
ENSG00000260450 (RP11-523L20.1)
 ENST00000562980 (RP11-523L20.1-001) 47965672-47971687 lincRNA
ENSG00000260497 (CTB-55P19.1)
 ENST00000568348 (CTB-55P19.1-001) 47760780-47760921 processed_pseudogene
ENSG00000261017 (RP11-3M1.3)
 ENST00000563813 (RP11-3M1.3-001) 48059671-48059995 processed_pseudogene
ENSG00000261325 (AC140542.2)
 ENST00000570024 (AC140542.2-001) 47849314-47887130 lincRNA
ENSG00000261336 (EIF4BP5)
eukaryotic translation initiation factor 4B pseudogene 5 		ENST00000567338 (EIF4BP5-001) 47565090-47566884 processed_pseudogene
ENSG00000262038 (RP11-177N22.3)
 ENST00000573040 (RP11-177N22.3-001) 47529190-47529916 sense_intronic
CIL_0002VQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036879-ENSMUSG00000036872 CGP 10090 8:85840959-86580686
GeneTranscriptPositionBiotype
ENSMUSG00000036872 (Abcc12)
ATP-binding cassette, sub-family C (CFTR/MRP), member 12 		ENSMUST00000080115 (Abcc12-201) 86504841-86566590 protein_coding
ENSMUST00000129898 (Abcc12-004) 86482260-86580655 nonsense_mediated_decay
ENSMUST00000131423 (Abcc12-001) 86504579-86580686 protein_coding
ENSMUST00000131806 (Abcc12-003) 86504841-86566590 nonsense_mediated_decay
ENSMUST00000152438 (Abcc12-002) 86533961-86580686 protein_coding
ENSMUST00000156066 (Abcc12-006) 86504583-86534747 nonsense_mediated_decay
ENSMUST00000156610 (Abcc12-005) 86504841-86566590 nonsense_mediated_decay
ENSMUSG00000036879 (Phkb)
phosphorylase kinase beta 		ENSMUST00000053771 (Phkb-001) 85841002-86061376 protein_coding
ENSMUST00000159716 (Phkb-006) 85840959-85879725 processed_transcript
ENSMUST00000159882 (Phkb-004) 85841008-85922416 processed_transcript
ENSMUST00000160611 (Phkb-003) 85840991-85937046 nonsense_mediated_decay
ENSMUST00000160731 (Phkb-005) 86017432-86030391 protein_coding
ENSMUST00000161850 (Phkb-009) 85841016-85922150 protein_coding
ENSMUST00000162305 (Phkb-002) 86035646-86060641 processed_transcript
ENSMUST00000162464 (Phkb-007) 85842787-85896537 protein_coding
ENSMUST00000162981 (Phkb-008) 85843051-85879812 nonsense_mediated_decay
ENSMUSG00000088192 (Gm23904)
predicted gene, 23904 		ENSMUST00000157567 (Gm23904-201) 86233854-86233977 snoRNA
ENSMUSG00000090043 (Gm16167)
predicted gene 16167 		ENSMUST00000160428 (Gm16167-001) 85853373-85854437 processed_pseudogene
ENSMUSG00000098439 (Hm629797)
cDNA sequence HM629797 		ENSMUST00000183645 (Hm629797-001) 85994245-85996642 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002VQ_0001ENSG00000102893ENST00000299167ENST00000323584ENST00000566044ENSG00000129636ENST00000320640ENST00000537184ENST00000542691ENST00000544001ENSG00000140798ENST00000311303ENST00000526251ENST00000528693ENST00000529084ENST00000529504ENST00000532355ENST00000532494ENST00000534418ENSG00000222268ENST00000410336ENSG00000259918ENST00000567995ENSG00000260450ENST00000562980ENSG00000260497ENST00000568348ENSG00000261017ENST00000563813ENSG00000261325ENST00000570024ENSG00000261336ENST00000567338ENSG00000262038ENST00000573040CIL_0002VQ_0002ENSMUSG00000036872ENSMUST00000080115ENSMUST00000131423ENSMUST00000131806ENSMUST00000152438ENSMUST00000156066ENSMUSG00000036879ENSMUST00000053771ENSMUST00000160731ENSMUST00000162305ENSMUSG00000088192ENSMUST00000157567ENSMUSG00000090043ENSMUST00000160428ENSMUSG00000098439ENSMUST00000183645
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102893 ENST00000299167 N/A 3.796±0.00 N/A 5.179±0.00 4.303±1.28 4.431±0.00 2.311±0.97 3.401±1.50 2.599±0.70 4.386±0.00 10.429±0.00 3.685±1.28 5.229±2.55 6.532±2.37
ENST00000323584 1.923±0.00 4.573±0.00 N/A N/A 6.160±0.00 2.648±0.00 4.236±2.31 5.981±0.00 4.025±0.00 N/A 10.487±6.65 N/A 3.766±0.00 6.843±0.00
ENST00000563376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566044 4.584±0.00 N/A 6.236±0.00 9.416±0.00 5.976±0.76 11.066±0.00 4.376±2.95 6.359±0.85 5.908±0.00 8.545±0.00 9.033±0.00 5.842±1.94 9.900±3.18 12.272±6.15
ENST00000566275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000129636 ENST00000320640 2.598±0.00 3.366±0.00 7.159±0.00 25.271±4.19 7.636±0.00 6.878±2.93 2.962±1.23 5.807±0.00 5.361±0.00 4.960±0.00 2.884±0.00 6.597±0.30 9.624±1.95 9.485±0.00
ENST00000537184 N/A N/A N/A N/A N/A 6.383±0.00 N/A N/A N/A N/A N/A 9.129±0.00 N/A N/A
ENST00000542691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.857±0.00 N/A N/A
ENST00000544001 7.112±0.00 8.444±0.00 N/A 15.688±0.00 12.068±0.00 7.610±0.00 14.025±0.00 15.929±0.00 10.663±4.26 11.901±0.00 N/A 7.551±0.65 22.120±4.90 12.194±0.00
ENST00000563350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000140798 ENST00000311303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A 1.146±0.00
ENST00000497206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A N/A
ENST00000527640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.722±0.00
ENST00000529084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.601±0.00
ENST00000529504 0.028±0.00 N/A N/A N/A 0.004±0.00 N/A N/A N/A 0.004±0.00 0.012±0.00 N/A 0.012±0.00 N/A N/A
ENST00000532355 N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000532494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.00 0.008±0.00 N/A N/A
ENST00000533185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.677±1.27
ENSG00000222268 ENST00000410336 N/A 1.251±0.00 N/A N/A N/A 0.961±0.00 N/A N/A N/A N/A N/A N/A 2.756±0.00 N/A
ENSG00000259918 ENST00000567995 N/A 0.036±0.00 1.490±0.00 0.106±0.00 0.632±0.00 0.437±0.00 0.066±0.03 0.159±0.00 0.402±0.37 0.801±0.00 N/A 1.878±0.00 N/A N/A
ENSG00000260450 ENST00000562980 N/A N/A N/A 0.457±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.578±0.09
ENSG00000260497 ENST00000568348 N/A N/A N/A N/A N/A N/A 0.407±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000261017 ENST00000563813 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.201±0.00 N/A N/A N/A 0.083±0.04
ENSG00000261325 ENST00000570024 N/A N/A N/A 0.397±0.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.00
ENSG00000261336 ENST00000567338 0.050±0.00 0.062±0.00 0.350±0.00 0.041±0.00 0.149±0.10 0.260±0.24 0.074±0.05 0.040±0.00 0.190±0.18 0.335±0.32 0.047±0.03 0.092±0.12 0.028±0.02 0.018±0.00
ENSG00000262038 ENST00000573040 0.359±0.00 0.500±0.00 0.637±0.00 0.121±0.03 0.123±0.04 1.026±0.95 0.026±0.00 0.191±0.00 0.547±0.45 0.215±0.00 0.024±0.00 0.227±0.10 N/A 0.357±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036872 ENSMUST00000080115 0.025±0.01 0.004±0.00 0.003±0.00 0.022±0.00 N/A N/A 0.013±0.00 0.013±0.00 0.027±0.02 N/A N/A 0.015±0.00 0.029±0.02 8.890±2.30
ENSMUST00000129898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131423 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A 0.341±0.00 7.852±4.86
ENSMUST00000131806 N/A 0.041±0.02 N/A 0.046±0.00 N/A N/A N/A N/A 0.007±0.00 N/A N/A N/A N/A N/A
ENSMUST00000152438 N/A N/A N/A N/A 0.035±0.00 N/A N/A 0.012±0.00 0.015±0.01 N/A N/A N/A N/A N/A
ENSMUST00000156066 0.057±0.05 0.051±0.02 0.020±0.00 0.148±0.06 0.032±0.01 0.055±0.00 0.031±0.02 0.017±0.01 0.047±0.05 0.045±0.02 0.019±0.00 0.066±0.03 0.805±1.30 14.704±5.64
ENSMUST00000156610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000036879 ENSMUST00000053771 5.170±3.10 5.407±1.80 5.465±4.13 3.738±1.91 6.363±0.59 3.547±0.80 N/A 4.796±1.64 2.211±0.48 4.833±1.49 19.177±4.52 4.598±1.72 1.914±1.20 1.360±0.64
ENSMUST00000159716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.190±0.00 N/A
ENSMUST00000161850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162305 4.548±0.00 5.274±1.76 7.537±0.41 4.864±3.36 10.521±0.53 N/A 2.672±0.17 3.698±0.23 1.919±0.86 N/A 69.690±24.59 9.726±3.15 3.925±2.18 1.736±0.00
ENSMUST00000162464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088192 ENSMUST00000157567 N/A N/A N/A 9.285±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090043 ENSMUST00000160428 0.210±0.08 0.072±0.00 0.106±0.00 0.039±0.00 0.329±0.19 0.455±0.25 0.130±0.07 0.137±0.07 0.053±0.03 0.169±0.06 0.051±0.00 0.349±0.30 0.106±0.07 2.000±0.51
ENSMUSG00000098439 ENSMUST00000183645 0.026±0.01 0.066±0.00 0.122±0.02 0.066±0.06 0.112±0.07 0.059±0.02 0.014±0.00 0.052±0.03 0.047±0.01 0.061±0.03 0.022±0.01 0.099±0.07 0.051±0.04 0.033±0.02

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