C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036872 Abcc12 10090 - 8:86482260-86580686 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000080115 Abcc12-201 86504841-86566590 protein_coding
  ENSMUST00000129898 Abcc12-004 86482260-86580655 nonsense_mediated_decay
  ENSMUST00000131423 Abcc12-001 86504579-86580686 protein_coding
  ENSMUST00000131806 Abcc12-003 86504841-86566590 nonsense_mediated_decay
  ENSMUST00000152438 Abcc12-002 86533961-86580686 protein_coding
  ENSMUST00000156066 Abcc12-006 86504583-86534747 nonsense_mediated_decay
  ENSMUST00000156610 Abcc12-005 86504841-86566590 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080115ENSMUST00000131423ENSMUST00000131806ENSMUST00000152438ENSMUST00000156066
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080115 0.025±0.01 0.004±0.00 0.003±0.00 0.022±0.00 N/A N/A 0.013±0.00 0.013±0.00 0.027±0.02 N/A N/A 0.015±0.00 0.029±0.02 8.890±2.30
ENSMUST00000131423 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A 0.341±0.00 7.852±4.86
ENSMUST00000131806 N/A 0.041±0.02 N/A 0.046±0.00 N/A N/A N/A N/A 0.007±0.00 N/A N/A N/A N/A N/A
ENSMUST00000152438 N/A N/A N/A N/A 0.035±0.00 N/A N/A 0.012±0.00 0.015±0.01 N/A N/A N/A N/A N/A
ENSMUST00000156066 0.057±0.05 0.051±0.02 0.020±0.00 0.148±0.06 0.032±0.01 0.055±0.00 0.031±0.02 0.017±0.01 0.047±0.05 0.045±0.02 0.019±0.00 0.066±0.03 0.805±1.30 14.704±5.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VQ CIL_0002VQ_0002 CGP 8:85840959-86580686

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006200 IEA ATP catabolic process
GO:0016021 IEA integral component of membrane
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013050 abcc12 ATP-binding cassette, sub-family C (CFTR/MRP), member 12 protein_coding Danio_rerio
ENSG00000140798 ABCC12 ATP-binding cassette, sub-family C (CFTR/MRP), member 12 protein_coding Homo_sapiens

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