C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000497206 ABCC12-002 ENSG00000140798 9606 - 16:48083696-48146430 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VQ CIL_0002VQ_0001 CGP 16:47461123-48156018

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080115 Abcc12-201 protein_coding Mus_musculus 0 3572
ENSMUST00000131423 Abcc12-001 protein_coding Mus_musculus 0 3572
ENSMUST00000131806 Abcc12-003 nonsense_mediated_decay Mus_musculus 0 2309
ENSMUST00000152438 Abcc12-002 protein_coding Mus_musculus 0 2242
ENSMUST00000129898 Abcc12-004 nonsense_mediated_decay Mus_musculus 0 2242
ENSMUST00000156610 Abcc12-005 nonsense_mediated_decay Mus_musculus 0 2032
ENSMUST00000156066 Abcc12-006 nonsense_mediated_decay Mus_musculus 0 1369

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