C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 17 open reading frame 80
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141219 C17orf80 9606 + 17:73232233-73248947 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000255557 C17orf80-004 73232233-73245339 protein_coding
  ENST00000268942 C17orf80-001 73232637-73248874 protein_coding
  ENST00000359042 C17orf80-201 73232622-73248947 protein_coding
  ENST00000426147 C17orf80-003 73232662-73245344 protein_coding
  ENST00000535032 C17orf80-005 73233220-73247527 protein_coding
  ENST00000577615 C17orf80-002 73232465-73247530 protein_coding
  ENST00000582391 C17orf80-007 73232729-73236022 protein_coding
  ENST00000582793 C17orf80-009 73233226-73247455 protein_coding
  ENST00000585109 C17orf80-006 73232529-73235810 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000268942ENST00000359042ENST00000426147ENST00000535032ENST00000577615
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000268942 N/A N/A 3.951±0.00 1.857±0.19 2.815±1.79 4.967±0.00 2.236±0.00 N/A 2.372±1.13 3.344±0.84 3.120±0.23 12.367±0.32
ENST00000359042 N/A 3.106±0.00 N/A N/A N/A 1.076±0.00 N/A 1.189±0.00 0.713±0.00 4.030±0.49 2.599±0.00 N/A
ENST00000426147 N/A N/A N/A N/A N/A 1.160±0.00 N/A N/A N/A N/A N/A N/A
ENST00000535032 N/A N/A N/A N/A 1.172±0.00 N/A 1.995±0.00 N/A N/A N/A N/A N/A
ENST00000577615 1.347±0.00 N/A 2.363±0.00 N/A N/A N/A N/A 1.686±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R4 CIL_0007R4_0001 VISTA 17:72990906-73592358
CIL_000679 CIL_000679_0001 CGP 17:73192632-73236753
CIL_00067A CIL_00067A_0001 CGP 17:73207353-73248947
CIL_00072C CIL_00072C_0001 CGP 17:73232233-73262352

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000041623 D11Wsu47e DNA segment, Chr 11, Wayne State University 47, expressed protein_coding Mus_musculus

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