C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00067A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000133193-ENSG00000141219 CGP 9606 17:73207353-73248947
GeneTranscriptPositionBiotype
ENSG00000133193 (FAM104A)
family with sequence similarity 104, member A 		ENST00000403627 (FAM104A-002) 73207353-73232367 protein_coding
ENST00000405159 (FAM104A-001) 73207353-73232371 protein_coding
ENST00000579872 (FAM104A-005) 73209575-73227700 protein_coding
ENST00000580032 (FAM104A-007) 73209508-73227748 protein_coding
ENST00000581110 (FAM104A-004) 73209566-73232394 protein_coding
ENST00000583024 (FAM104A-006) 73209605-73232320 protein_coding
ENST00000583178 (FAM104A-003) 73209488-73236753 processed_transcript
ENSG00000166685 (COG1)
component of oligomeric golgi complex 1 		ENST00000299886 (COG1-001) 73192990-73208507 protein_coding
ENST00000438720 (COG1-002) 73193072-73208504 protein_coding
ENST00000577238 (COG1-007) 73205938-73207089 retained_intron
ENST00000577844 (COG1-006) 73205136-73206188 retained_intron
ENST00000580271 (COG1-008) 73205571-73207089 retained_intron
ENST00000582512 (COG1-010) 73205615-73208420 protein_coding
ENST00000582587 (COG1-005) 73193093-73197081 nonsense_mediated_decay
ENST00000582672 (COG1-011) 73206159-73207931 protein_coding
ENST00000582973 (COG1-009) 73206741-73208507 nonsense_mediated_decay
ENST00000618996 (COG1-201) 73192632-73208503 protein_coding
ENSG00000265010 (RP11-661C3.2)
 ENST00000579037 (RP11-661C3.2-001) 73243093-73244706 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_00067A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041629-ENSMUSG00000041623 CGP 10090 11:113661319-113694647
GeneTranscriptPositionBiotype
ENSMUSG00000018661 (Cog1)
component of oligomeric golgi complex 1 		ENSMUST00000018805 (Cog1-001) 113649169-113662947 protein_coding
ENSMUST00000063776 (Cog1-002) 113649328-113662399 protein_coding
ENSMUST00000123085 (Cog1-007) 113654687-113656249 retained_intron
ENSMUST00000134418 (Cog1-004) 113657530-113661665 protein_coding
ENSMUST00000137878 (Cog1-003) 113659283-113662400 protein_coding
ENSMUST00000142069 (Cog1-006) 113657512-113661629 protein_coding
ENSMUST00000148736 (Cog1-008) 113657375-113667054 protein_coding
ENSMUST00000152653 (Cog1-005) 113658578-113662400 nonsense_mediated_decay
ENSMUSG00000041623 (D11Wsu47e)
DNA segment, Chr 11, Wayne State University 47, expressed 		ENSMUST00000042227 (D11Wsu47e-002) 113684412-113694647 protein_coding
ENSMUST00000106621 (D11Wsu47e-001) 113684447-113694647 protein_coding
ENSMUST00000123466 (D11Wsu47e-003) 113684440-113688213 protein_coding
ENSMUST00000153732 (D11Wsu47e-004) 113685086-113688128 protein_coding
ENSMUSG00000041629 (Fam104a)
family with sequence similarity 104, member A 		ENSMUST00000120194 (Fam104a-001) 113661319-113684155 protein_coding
ENSMUSG00000083339 (Gm11693)
predicted gene 11693 		ENSMUST00000119625 (Gm11693-001) 113678530-113679331 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00067A_0001ENSG00000133193ENST00000403627ENST00000405159ENST00000579872ENST00000580032ENST00000581110ENST00000583024ENST00000583178ENSG00000166685ENST00000299886ENST00000438720ENST00000577238ENST00000577844ENST00000580271ENST00000582512ENST00000582587ENST00000582672ENST00000582973ENST00000618996ENSG00000265010ENST00000579037CIL_00067A_0002ENSMUSG00000018661ENSMUST00000018805ENSMUST00000063776ENSMUST00000123085ENSMUST00000134418ENSMUST00000137878ENSMUST00000142069ENSMUST00000148736ENSMUST00000152653ENSMUSG00000041623ENSMUST00000042227ENSMUST00000106621ENSMUST00000123466ENSMUST00000153732ENSMUSG00000041629ENSMUST00000120194ENSMUSG00000083339ENSMUST00000119625
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00067A_0001ENSG00000133193ENST00000403627ENST00000405159ENSG00000166685ENST00000299886ENST00000618996ENSG00000265010ENST00000579037CIL_00067A_0002ENSMUSG00000018661ENSMUST00000018805ENSMUSG00000041623ENSMUST00000042227ENSMUST00000106621ENSMUST00000123466ENSMUST00000153732ENSMUSG00000041629ENSMUST00000120194ENSMUSG00000083339ENSMUST00000119625
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133193 ENST00000403627 10.149±0.00 10.176±0.00 N/A 10.571±0.00 9.916±0.00 6.057±0.00 3.304±1.93 3.907±2.48 2.785±0.00 3.336±1.41 6.598±0.00 9.164±1.19 12.838±2.73 22.190±0.00
ENST00000405159 N/A 5.455±0.00 0.975±0.00 N/A 2.870±0.00 N/A N/A N/A 1.715±0.00 2.886±0.00 N/A N/A 4.308±0.00 33.215±4.37
ENST00000579872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166685 ENST00000299886 10.265±0.00 12.528±0.00 1.685±0.00 10.290±4.32 11.246±0.00 5.077±1.51 5.356±3.95 11.052±0.00 3.806±0.97 5.012±2.39 9.310±0.00 7.972±3.70 10.229±3.37 22.261±0.00
ENST00000438720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618996 N/A N/A N/A N/A 1.884±0.00 N/A N/A N/A N/A N/A 4.963±1.78 N/A N/A N/A
ENSG00000265010 ENST00000579037 N/A 0.600±0.00 N/A 0.206±0.00 0.298±0.00 0.176±0.00 0.037±0.00 0.234±0.00 0.034±0.00 0.099±0.00 N/A 0.113±0.00 N/A 0.258±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018661 ENSMUST00000018805 8.375±4.05 8.241±1.88 12.403±0.00 28.453±6.48 5.554±1.48 12.893±5.72 1.718±0.42 8.126±2.65 5.711±3.29 7.718±2.55 3.856±0.00 5.153±0.81 2.964±0.99 28.412±4.51
ENSMUST00000063776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041623 ENSMUST00000042227 1.036±0.03 1.145±0.46 2.025±0.49 2.822±1.41 1.533±0.23 1.127±0.65 0.437±0.04 1.337±0.65 1.635±0.91 1.328±0.68 0.302±0.15 1.671±0.33 2.934±1.44 21.637±0.00
ENSMUST00000106621 3.064±0.96 N/A 2.081±0.07 5.393±1.01 0.715±0.24 1.109±0.44 0.600±0.31 1.076±0.48 1.720±0.96 0.820±0.24 0.638±0.32 3.263±1.67 3.108±0.96 105.001±6.89
ENSMUST00000123466 N/A N/A N/A 2.160±0.00 N/A N/A N/A N/A N/A N/A N/A 3.498±0.00 N/A N/A
ENSMUST00000153732 N/A N/A N/A 2.488±0.00 N/A N/A N/A N/A N/A N/A N/A 6.358±1.76 4.341±1.69 156.049±0.00
ENSMUSG00000041629 ENSMUST00000120194 15.133±2.79 39.722±8.21 19.501±1.27 22.349±10.49 19.418±3.95 30.362±3.31 6.760±1.38 15.787±2.98 15.093±6.27 17.914±3.70 12.036±1.23 25.059±7.46 13.507±3.90 52.246±26.81
ENSMUSG00000083339 ENSMUST00000119625 0.182±0.04 0.095±0.00 0.092±0.02 0.085±0.03 0.153±0.01 0.146±0.10 0.048±0.00 0.081±0.03 0.178±0.12 0.058±0.00 N/A 0.110±0.01 0.280±0.07 0.145±0.12

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