C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 16 (monocarboxylate transporter), member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141526 SLC16A3 9606 + 17:82228397-82261129 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000392339 SLC16A3-201 82232232-82239498 protein_coding
  ENST00000392341 SLC16A3-202 82228406-82239498 protein_coding
  ENST00000577650 SLC16A3-016 82229060-82237320 protein_coding
  ENST00000578522 SLC16A3-008 82234899-82237177 protein_coding
  ENST00000578574 SLC16A3-011 82229062-82236895 retained_intron
  ENST00000578684 SLC16A3-012 82229058-82237705 protein_coding
  ENST00000578810 SLC16A3-017 82236474-82237416 retained_intron
  ENST00000579572 SLC16A3-013 82229068-82237303 retained_intron
  ENST00000580098 SLC16A3-007 82232232-82237475 protein_coding
  ENST00000580189 SLC16A3-009 82235053-82237439 protein_coding
  ENST00000581287 SLC16A3-001 82233687-82240086 protein_coding
  ENST00000581642 SLC16A3-006 82228448-82236457 retained_intron
  ENST00000582715 SLC16A3-015 82229093-82239481 protein_coding
  ENST00000582743 SLC16A3-002 82229032-82239479 protein_coding
  ENST00000582946 SLC16A3-010 82235774-82237261 protein_coding
  ENST00000583025 SLC16A3-018 82237170-82261129 protein_coding
  ENST00000583237 SLC16A3-005 82228421-82237427 protein_coding
  ENST00000583444 SLC16A3-003 82229045-82231926 retained_intron
  ENST00000584689 SLC16A3-004 82228397-82237644 protein_coding
  ENST00000584781 SLC16A3-014 82229055-82237282 processed_transcript
  ENST00000617373 SLC16A3-203 82234899-82239498 protein_coding
  ENST00000619321 SLC16A3-204 82235774-82239498 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonLungMuscleOvaryPlacentaTestisENST00000581287ENST00000582743ENST00000619321
Transcript ID Adipose Colon Lung Muscle Ovary Placenta Testis
ENST00000581287 N/A N/A N/A N/A 1.202±0.00 N/A N/A
ENST00000582743 39.991±0.00 22.440±0.00 58.329±0.00 N/A 28.034±0.00 76.856±48.67 27.038±0.00
ENST00000619321 N/A N/A 2.184±0.00 4.000±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019I CIL_00019I_0001 CGP 17:82101460-82261129
CIL_00043R CIL_00043R_0002 CGP 17:82228397-82273731

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 IDA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006090 TAS pyruvate metabolic process
GO:0007596 TAS blood coagulation
GO:0008028 TAS monocarboxylic acid transmembrane transporter activity
GO:0015293 IEA symporter activity
GO:0015355 IEA secondary active monocarboxylate transmembrane transporter activity
GO:0015629 IDA actin cytoskeleton
GO:0015711 IEA organic anion transport
GO:0015718 TAS monocarboxylic acid transport
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0031965 IDA nuclear membrane
GO:0035879 IEA plasma membrane lactate transport
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0050900 TAS leukocyte migration
GO:0055085 IEA:TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028583 SLC16A3 (1 of 2) solute carrier family 16 (monocarboxylate transporter), member 3 protein_coding Danio_rerio
ENSDARG00000045051 slc16a3 solute carrier family 16 (monocarboxylic acid transporters), member 3 protein_coding Danio_rerio
ENSMUSG00000025161 Slc16a3 solute carrier family 16 (monocarboxylic acid transporters), member 3 protein_coding Mus_musculus

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