C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00043R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000028583-ENSDARG00000008370 CGP 7955 3:36160097-36209462
GeneTranscriptPositionBiotype
ENSDARG00000008370 (csnk1da)
casein kinase 1, delta a
ENSDART00000025326 (csnk1da-001) 36172321-36209462 protein_coding
ENSDARG00000028583 (SLC16A3 (1 of 2))
solute carrier family 16 (monocarboxylate transporter), member 3
ENSDART00000038525 (SLC16A3 (1 of 2)-001) 36160097-36166512 protein_coding
CIL_00043R_0002 (Click to Hide/Show)
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Source ID Type Tax ID Position
ENSG00000141526-ENSG00000141551 CGP 9606 17:82228397-82273731
GeneTranscriptPositionBiotype
CIL_00043R_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025161-ENSMUSG00000025162 CGP 10090 11:120948480-120991330
GeneTranscriptPositionBiotype
ENSMUSG00000025161 (Slc16a3)
solute carrier family 16 (monocarboxylic acid transporters), member 3
ENSMUST00000070653 (Slc16a3-001) 120948480-120958775 protein_coding
ENSMUST00000100130 (Slc16a3-201) 120949067-120959000 protein_coding
ENSMUST00000129473 (Slc16a3-005) 120949071-120956861 protein_coding
ENSMUST00000133029 (Slc16a3-003) 120950688-120955273 protein_coding
ENSMUST00000134540 (Slc16a3-004) 120955226-120956231 retained_intron
ENSMUST00000140467 (Slc16a3-006) 120951138-120954212 processed_transcript
ENSMUST00000154187 (Slc16a3-002) 120949053-120956747 protein_coding
ENSMUST00000168579 (Slc16a3-202) 120949081-120960868 protein_coding
ENSMUSG00000025162 (Csnk1d)
casein kinase 1, delta
ENSMUST00000018274 (Csnk1d-001) 120961749-120991330 protein_coding
ENSMUST00000070575 (Csnk1d-002) 120961749-120991092 protein_coding
ENSMUST00000131375 (Csnk1d-003) 120963648-120965686 processed_transcript
ENSMUST00000139267 (Csnk1d-007) 120967612-120968061 processed_transcript
ENSMUST00000141071 (Csnk1d-008) 120963773-120971625 processed_transcript
ENSMUST00000146837 (Csnk1d-004) 120972490-120990987 nonsense_mediated_decay
ENSMUST00000154483 (Csnk1d-006) 120972472-120990871 protein_coding
ENSMUST00000155070 (Csnk1d-005) 120982857-120991051 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00043R_0001ENSDARG00000008370ENSDART00000025326ENSDARG00000028583ENSDART00000038525CIL_00043R_0003ENSMUSG00000025161ENSMUST00000070653ENSMUST00000100130ENSMUST00000129473ENSMUST00000133029ENSMUST00000134540ENSMUST00000140467ENSMUST00000154187ENSMUST00000168579ENSMUSG00000025162ENSMUST00000018274ENSMUST00000070575ENSMUST00000131375ENSMUST00000139267ENSMUST00000141071ENSMUST00000146837ENSMUST00000154483ENSMUST00000155070
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00043R_0001ENSDARG00000008370ENSDART00000025326ENSDARG00000028583ENSDART00000038525CIL_00043R_0003ENSMUSG00000025161ENSMUST00000070653ENSMUST00000100130ENSMUST00000129473ENSMUST00000154187ENSMUST00000168579ENSMUSG00000025162ENSMUST00000018274ENSMUST00000070575ENSMUST00000154483
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008370 ENSDART00000025326 N/A N/A N/A 27.104±2.28 N/A N/A 5.685±5.95 9.727±10.78 2.173±0.00 N/A 16.732±0.00 N/A N/A N/A
ENSDARG00000028583 ENSDART00000038525 N/A N/A N/A 2.052±0.87 N/A N/A 0.614±0.25 0.666±0.00 N/A N/A 0.474±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025161 ENSMUST00000070653 1.813±1.19 0.216±0.04 4.234±0.27 0.822±0.42 3.029±3.12 2.938±1.10 0.146±0.00 0.230±0.01 10.271±6.23 4.809±0.63 67.186±40.55 5.071±1.79 50.643±43.63 N/A
ENSMUST00000100130 0.562±0.03 N/A 1.565±0.43 0.498±0.12 0.883±0.00 0.996±0.10 0.338±0.08 0.272±0.05 3.217±0.20 N/A 22.660±0.00 1.024±0.46 5.016±0.00 0.584±0.00
ENSMUST00000129473 4.016±0.00 0.844±0.39 N/A 0.779±0.00 3.186±3.56 4.454±1.88 1.026±0.02 0.620±0.00 0.180±0.02 7.274±0.56 N/A 8.829±2.14 N/A N/A
ENSMUST00000133029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154187 0.529±0.00 0.488±0.16 3.428±0.41 0.977±0.28 7.698±1.72 4.010±2.49 0.714±0.16 0.606±0.14 8.791±6.63 N/A 62.687±10.26 7.082±2.42 18.437±6.95 N/A
ENSMUST00000168579 0.271±0.10 0.093±0.02 N/A 0.130±0.03 0.164±0.01 0.438±0.05 0.117±0.04 0.088±0.01 0.070±0.02 N/A N/A 0.977±0.16 N/A N/A
ENSMUSG00000025162 ENSMUST00000018274 12.289±2.69 17.486±2.74 15.103±0.37 39.743±25.83 10.415±3.61 9.491±2.78 7.368±0.89 12.106±0.99 8.047±3.44 11.440±2.43 7.819±1.27 22.272±5.47 13.128±1.28 31.250±13.44
ENSMUST00000070575 30.765±7.07 11.924±3.52 39.232±0.49 12.554±2.79 18.084±4.04 32.834±3.33 5.575±0.71 12.894±1.28 13.925±3.07 27.242±4.69 7.806±1.12 27.856±6.24 33.550±10.10 3.174±0.00
ENSMUST00000131375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 74.367±0.00
ENSMUST00000155070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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