C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 165
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000586604 RNF165-002 ENSG00000141622 9606 + 18:46334224-46463140 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENST00000586604
Transcript ID Bladder Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000586604 0.027±0.00 1.892±0.00 0.197±0.15 0.109±0.01 0.172±0.00 0.025±0.00 0.047±0.00 0.046±0.04 0.056±0.04 0.069±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000B1 CIL_0000B1_0002 CGP 18:46326809-46657033

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182024 Rnf165-005 protein_coding Mus_musculus 0 1530
ENSMUST00000026494 Rnf165-003 protein_coding Mus_musculus 0 1369
ENSMUST00000182805 Rnf165-008 retained_intron Mus_musculus 0 405
ENSMUST00000182153 Rnf165-004 protein_coding Mus_musculus 0 195
ENSMUST00000182146 Rnf165-002 protein_coding Mus_musculus 5e-24 119
ENSDART00000109989 rnf165b-201 protein_coding Danio_rerio 0.00000006 66

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