C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 165
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543885 RNF165-201 ENSG00000141622 9606 + 18:46334224-46460820 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverMuscleENST00000543885
Transcript ID Brain Breast Colon Heart Liver Muscle
ENST00000543885 0.461±0.00 0.044±0.00 0.050±0.00 0.083±0.00 0.056±0.00 0.139±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000B1 CIL_0000B1_0002 CGP 18:46326809-46657033

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182024 Rnf165-005 protein_coding Mus_musculus 0 1530
ENSMUST00000026494 Rnf165-003 protein_coding Mus_musculus 0 1369
ENSMUST00000182805 Rnf165-008 retained_intron Mus_musculus 0 405
ENSMUST00000182153 Rnf165-004 protein_coding Mus_musculus 0 195
ENSMUST00000182146 Rnf165-002 protein_coding Mus_musculus 3e-24 119
ENSDART00000109989 rnf165b-201 protein_coding Danio_rerio 0.00000004 66

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