C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: threonine synthase-like 2 (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000144115 THNSL2 9606 + 2:88170295-88186636 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324166 THNSL2-001 88171460-88186626 protein_coding
  ENST00000343544 THNSL2-002 88170398-88186627 protein_coding
  ENST00000377254 THNSL2-201 88170295-88186636 protein_coding
  ENST00000419759 THNSL2-005 88170353-88174795 protein_coding
  ENST00000449349 THNSL2-004 88170353-88186626 protein_coding
  ENST00000464022 THNSL2-006 88182555-88183077 retained_intron
  ENST00000475910 THNSL2-003 88173273-88177141 retained_intron
  ENST00000476349 THNSL2-007 88178950-88183457 retained_intron
  ENST00000496165 THNSL2-009 88182697-88183807 processed_transcript
  ENST00000496844 THNSL2-008 88174808-88186318 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000324166ENST00000343544ENST00000377254ENST00000449349ENST00000475910ENST00000496844
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000324166 0.551±0.00 0.760±0.00 1.347±0.00 0.315±0.00 0.388±0.00 0.249±0.00 0.509±0.38 2.045±1.41 1.799±0.00 0.438±0.03 2.953±0.00 2.143±1.33 2.753±0.64 2.805±1.87
ENST00000343544 0.962±0.00 0.793±0.00 N/A 0.279±0.00 1.704±0.00 1.198±0.87 1.615±0.00 N/A 2.163±0.00 2.451±0.00 11.347±0.00 4.254±0.00 2.852±0.00 N/A
ENST00000377254 N/A N/A N/A 1.025±0.00 N/A 2.864±0.00 1.572±0.00 13.568±0.00 4.049±0.00 2.074±0.00 16.902±0.00 8.297±0.98 8.088±0.58 4.939±0.00
ENST00000449349 N/A N/A N/A 0.912±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475910 0.537±0.00 N/A N/A N/A 0.272±0.00 N/A N/A N/A N/A N/A N/A 1.082±0.00 N/A N/A
ENST00000496844 1.935±0.00 2.176±0.00 2.134±0.00 2.616±0.00 2.712±1.27 N/A N/A N/A N/A 1.562±0.00 N/A 6.225±0.00 6.159±0.44 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005125 IEA cytokine activity
GO:0005575 ND cellular_component
GO:0005615 IEA extracellular space
GO:0008150 ND biological_process
GO:0009071 ISS serine family amino acid catabolic process
GO:0016311 ISS dephosphorylation
GO:0016829 IEA lyase activity
GO:0030170 ISS pyridoxal phosphate binding
GO:0046360 ISS 2-oxobutyrate biosynthetic process
GO:0070905 ISS serine binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032584 thnsl2 threonine synthase-like 2 (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000054474 Thnsl2 threonine synthase-like 2 (bacterial) protein_coding Mus_musculus

Loading