C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: threonine synthase-like 2 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000343544 THNSL2-002 ENSG00000144115 9606 + 2:88170398-88186627 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaENST00000343544
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENST00000343544 0.962±0.00 0.793±0.00 0.279±0.00 1.704±0.00 1.198±0.87 1.615±0.00 2.163±0.00 2.451±0.00 11.347±0.00 4.254±0.00 2.852±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005125 IEA cytokine activity
GO:0005575 ND cellular_component
GO:0005615 IEA extracellular space
GO:0008150 ND biological_process
GO:0009071 ISS serine family amino acid catabolic process
GO:0016311 ISS dephosphorylation
GO:0016829 IEA lyase activity
GO:0030170 ISS pyridoxal phosphate binding
GO:0046360 ISS 2-oxobutyrate biosynthetic process
GO:0070905 ISS serine binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160918 Thnsl2-001 protein_coding Mus_musculus 0 1195
ENSMUST00000074241 Thnsl2-002 protein_coding Mus_musculus 0 1188
ENSMUST00000170455 Thnsl2-004 processed_transcript Mus_musculus 0 763
ENSMUST00000170753 Thnsl2-003 protein_coding Mus_musculus 0 257

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