C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: threonine synthase-like 2 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000324166 THNSL2-001 ENSG00000144115 9606 + 2:88171460-88186626 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000324166
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000324166 0.551±0.00 0.760±0.00 1.347±0.00 0.315±0.00 0.388±0.00 0.249±0.00 0.509±0.38 2.045±1.41 1.799±0.00 0.438±0.03 2.953±0.00 2.143±1.33 2.753±0.64 2.805±1.87

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005125 IEA cytokine activity
GO:0005575 ND cellular_component
GO:0005615 IEA extracellular space
GO:0008150 ND biological_process
GO:0009071 ISS serine family amino acid catabolic process
GO:0016311 ISS dephosphorylation
GO:0016829 IEA lyase activity
GO:0030170 ISS pyridoxal phosphate binding
GO:0046360 ISS 2-oxobutyrate biosynthetic process
GO:0070905 ISS serine binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074241 Thnsl2-002 protein_coding Mus_musculus 0 1500
ENSMUST00000160918 Thnsl2-001 protein_coding Mus_musculus 0 1498
ENSMUST00000170455 Thnsl2-004 processed_transcript Mus_musculus 0 763
ENSMUST00000170753 Thnsl2-003 protein_coding Mus_musculus 0 257

Loading