C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: threonine synthase-like 2 (bacterial)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054474 Thnsl2 10090 - 6:71128166-71144346 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000074241 Thnsl2-002 71128398-71144338 protein_coding
  ENSMUST00000160918 Thnsl2-001 71128166-71144346 protein_coding
  ENSMUST00000170455 Thnsl2-004 71131766-71144331 processed_transcript
  ENSMUST00000170753 Thnsl2-003 71128656-71131972 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074241ENSMUST00000160918ENSMUST00000170455ENSMUST00000170753
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074241 6.196±3.44 3.016±0.00 1.606±0.45 1.013±0.36 2.886±1.25 4.791±0.00 1.620±0.37 62.572±15.24 4.780±2.58 1.994±0.65 3.352±0.72 3.848±2.21 7.745±8.99 1.148±0.55
ENSMUST00000160918 1.625±0.00 9.649±3.58 0.660±0.16 0.324±0.13 3.816±0.73 7.839±2.27 0.600±0.29 34.814±14.35 13.196±10.69 3.343±1.46 1.067±0.55 3.474±1.65 2.448±3.01 0.522±0.12
ENSMUST00000170455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.939±0.62 N/A N/A
ENSMUST00000170753 N/A 7.654±0.10 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.323±0.00 1.530±0.04 1.128±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Q8 CIL_0004Q8_0002 CGP 6:71128166-71205023

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0009071 IDA serine family amino acid catabolic process
GO:0016311 IDA dephosphorylation
GO:0016829 IEA lyase activity
GO:0030170 IDA pyridoxal phosphate binding
GO:0046360 IDA 2-oxobutyrate biosynthetic process
GO:0070905 IDA serine binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032584 thnsl2 threonine synthase-like 2 (S. cerevisiae) protein_coding Danio_rerio
ENSG00000144115 THNSL2 threonine synthase-like 2 (S. cerevisiae) protein_coding Homo_sapiens

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